Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2574 atgGAGCCATTAGGCAAAACACCGTCATTCTATTCTCCCAAAACAAATCAAGCAAAGCTGATTCGTCACCCACTGCTCGGAACAAATTGTATACCTGGAGAGCGTGAATGTGTGCAGTTGATAAATTTACACACAATAAGAGATTATGTCAGCCTTTTGTTGACTTATCCAATAAGAACAGCTCAAGATAGCACCAGATTTCACCTTTGGACTCATCAAGTTTCAAATGAGGATCATTTGACAACAGATCAACAATACCGTCTATTGCTTGACAACAATCCACTTAGACATTTCCAAGGACTTGTACCAATGGAAATAATAAGAGATATAGAAAATGGTTTGAATGTCAGGCTTGTAGATCATATAACTGAGATACCATATGCCATTCTCAATTTAGCAGTGGATCTTGCTGTTCATCAGCTGATACAAACTTTACTTTCTGGAGATGACTATTTTCGTAGCATTCACCATGTCATGTTTTCCACCAGAAATGGAGCTGAAAGAAGACAGGtttttgaaaagataaaagTGGTCTTGAAAGACAAGGACAACATGCCTCATTTCAGTGAAATCTTCCATGGACTCTTGTGTGTTGATGCCTCAGTTTATCGATGCCAAGTCCATGTTCTACAACAGATAGCTCAACAGCTTCAGCTTCCAATGATGGAAGACAATGACTGCCTTCTTACATGGATCAAAGAAAAGATGTCAAGGAATAGATATCTAGTGGTTCTGATGGATGGAGTTGAAGAGCCTCTTGAGATACAAAATCTGGGTTTTGCTAAGAAAGAATTTGCAGGAGTCGTGGTGTTGATTTCTACCGAATCTCGAAAGCAGGCGAATCAAGAATTAGCCATGGATCTAAAAATTGGGATAAAGAATCATTTGTTGCCATGGGAGGTCTTCTGTCACACAGTAGGCAAATATTGGCTTCAATGTTCATCTAAAGCCATCCAGAAAATTGCAGTGAGTATAGTTGTGGAGTGTGGTAGCCATCTTTTTGCCCTTGCCCTCGTTGCGAAGTTGCTCAAGAATGTGGAAGAAGTTGCAGTATGGGAATCTGTTTTGGACAGATTGCGTAGGCTTCATCATCCTTCCTATGATATTAGTTGGTTTCATGGTTGTAGCAGAGTTATGGTTAATGCTTTCATAAACTTAATCTGGAATGGCACAAGTCAGACACAAAAACATTGTCTTCTGCGTTGCTTATACATGCCAGAAATCAAAGATGGAAAGCTTGAGGACGAGTTGATCAATGATTGGATATCTTCTCTGTTTATGGATGCTAGTGAAGCCAAGCATAACTTGAGACAGCTTGTAGACCGTTCTGTATTATTTCAGTTTGAAGAAACCAAATCCAGATTTATCCAAATGCCATATGACACCTATGCTATTTTGCAATCATTAAACAGCCATTATCCTTTGTTCATGAAGAAAGCTGGGTTGGGGTTGACTGAGCCACCAAACATTGCACTATGGGAAAGTTCTGTATGCATTGAACTGGGGGACAATAAATTGTCTGAACTTCCTTTATCTCCAAACTTCTTGGAACTCAAAGTGCTGAAGTTGCAAGGAAATGTTGACTTGACAAGAATTCCGCCTGAGTTTTTCTTCCAAGTGCCTCTACTTTGCCTCATAGACTTGTCCTACACTAGTGTAAGAGAACTACCAAATTCCTTTTTTGAACTGGAGCAACTAAGAGAATTATATTTGAGAAGTTGTGAATGCTTCATGAAATTACCTCCTGAGATTGGAAAATTGAAGAAACTTGAGAAGCTTGATCTTGATGGGACATGGATCACTCATCTTCCAGATGAGGTCCAAGAGTTGACCAATATGCAAAGCTTGAGCCTCTCCTTCTATGAATATCGTGGAAAGAAAAGCAAGCAATACTCATGCTCAACAATTATTTCTCCAGGGGTGATTCCAAAACTAGAGTGCTTAAAACATTTAAGCGTTGATGTGAACCCTGATGATGAGCGGTGGGTTGAGAATGTACAAGTCATTCTACTGGAAATCATAGGGCTAAAGTTCTTGCAAACTGTTAGTTTATACATCCCACAAACAGAACTTTTGAAGCTCATACCATCCCGCattttaaaacttgattttagaTTTGTTATTGGCAAGCACATGGAGAGGATCATATCAGGTACACCACCTACATATGAAGCCAAATTTAAACAAAGTGATCATAGCTTGAAGTTTGTGAAAGGTGTTGATATCCCTagtgaaataaaaaaacttgTTGGACACAGCAAGGCTTTATTTTTGGATCGACATATGATCATCAAGAATCTCTCTGAATTTGGAATGATGAATTTAGAGCAACTGCGAGTATGCATGATGTCAGAATGTAAAGAAATGCAGACAATTGTTGATGGAAGACACTCAAATAGTAACAATGATATGTTGTCACATCTGCTATACTTGAGTGTATCATACATGAAGAATTTAAGAAGCATATGGGAAGGGCCAAACCCACCAAGCAGCTTTTTGGGTATGCTTAAGTCCTTAGCATTGCACAACTGCCCTAATTTAACAACTGTCTTCACTTTGGATTTTTTGGGCAATCTTTCACTTTTAAAGGAGCTTATAGTTAAGGAATGTCCAAAAGTAACCACTTTGATAAAAGGAAGTGATGGGTCATCTGAATGTGAAGCTAAGGTTTTCCTCCCCAAGTTGAGAAAGATAATTCTTGTCCACCTTCCAGAGTTGATCAACATTTGCAATGGACTTCACATTGGTCCATGTTTAGAGATTATAGGAATTTATGATTGCCCCAAGCTTCAAAGCCTTTCCAAGACGGAACTGTCAAGTCAAAGTCTGAAGGTCATCAAAGGAGAAACCAAGTGGTGGGAGGCATTGAAATGGAGTGAAGTAGATTGGGGAAAAGCTTGTCTACCTCATAAGTTTGATGGCTTGTTTAGCTCAGTTGATATAGAGGATGACATGATGACTCAATTAGGGGTATATATGGAGGATGACAATGATTCAGATAATATCTCAGCAGGTGGGATAGTGGATGACGGATACAGTTGGAGGAAATATGGCCAGAAAGACATTCTTGGGTCCAAATTTCCTAAGCACTCGATTACAACAAGATGGCCTTTTGAGGACGACGGATACACTTGGAGGAAATATGGCCAGAAAGACATTCTTGGGTCCAAATTTCCAAGAAGCTATTACAGATGCAATCATAAATTTGATAAAGGATGCAATGCTAAGAAGCAAGTACAAAGCTGTGACGAAGACCCAACTATCTCATCACATACAGAGCCATTACAGCCTTTCAGTGACAGGATGTTGAAGGACCAAAAGCAAAATGCTGACAGAAGGAGAATAACTTGGTCAATGATGTCAAAAGACTTACCTGATGGGACCttcgatgatgatgatgatgatggatacAAATATCCAAGGGGAAAGCAAGCCTCTAATGCAGTTCTTGATTCATTTCCTTCTATGGACGAATCTGTTTCCACAGCAGCTTCCTATGGCGACTCCGTTATCACTGACCTTACTCAAGCTTCTTCTGCTTCTAAGGGAATCGGTTCTGCATTGGGTAGCGAAACAAGAAGATCAAGAATTAGTATGAAATTCCCAGACATGAATCCGACGGGGAAATCACCAAGAAGAGAACTGCAAGGCCCACGCCCCACGCCTCTCAGGATACACAAAGATTCTCACAAGATCAAGAAACCGCCGTTGCCGCCGCAGCAACCGCCCCAACCGCAACCGCCGCCGCGCCAACCTGTCATCATGGTGATGCACACCACGCCGGGTGACTTCATGGATCTTGTTAAATGCCTCACTGGCTgtacttcctcttcttcttcttcttccaatatGGTGTCCACGTCATCAAATGATCCTTTCAATCGCAATAATGGTGGCGATATGGTATCCCCGGCTGCGCGGTACGCCTCTATAGAGAAGGCCAGGACTCCCCAAGGCAAGAAATTAGGCGCAgcggataataataataataatattattggtgGTGGAGAAACACAATACTTGATATTTGGAATCCTGACGGAGTTTACAGATGATGAGCTGATGAATTTTGAAAAGAGCAAGTTACATTTCTTCCCCTTCATTAAGCCACCTGATCTTCCTGAGATGGAGGCAGTAAAGTCAAGGCTTGGACACATCAAGTTTCAAATGCAAATTGTTCCATAG 4185 0.3964 MEPLGKTPSFYSPKTNQAKLIRHPLLGTNCIPGERECVQLINLHTIRDYVSLLLTYPIRTAQDSTRFHLWTHQVSNEDHLTTDQQYRLLLDNNPLRHFQGLVPMEIIRDIENGLNVRLVDHITEIPYAILNLAVDLAVHQLIQTLLSGDDYFRSIHHVMFSTRNGAERRQVFEKIKVVLKDKDNMPHFSEIFHGLLCVDASVYRCQVHVLQQIAQQLQLPMMEDNDCLLTWIKEKMSRNRYLVVLMDGVEEPLEIQNLGFAKKEFAGVVVLISTESRKQANQELAMDLKIGIKNHLLPWEVFCHTVGKYWLQCSSKAIQKIAVSIVVECGSHLFALALVAKLLKNVEEVAVWESVLDRLRRLHHPSYDISWFHGCSRVMVNAFINLIWNGTSQTQKHCLLRCLYMPEIKDGKLEDELINDWISSLFMDASEAKHNLRQLVDRSVLFQFEETKSRFIQMPYDTYAILQSLNSHYPLFMKKAGLGLTEPPNIALWESSVCIELGDNKLSELPLSPNFLELKVLKLQGNVDLTRIPPEFFFQVPLLCLIDLSYTSVRELPNSFFELEQLRELYLRSCECFMKLPPEIGKLKKLEKLDLDGTWITHLPDEVQELTNMQSLSLSFYEYRGKKSKQYSCSTIISPGVIPKLECLKHLSVDVNPDDERWVENVQVILLEIIGLKFLQTVSLYIPQTELLKLIPSRILKLDFRFVIGKHMERIISGTPPTYEAKFKQSDHSLKFVKGVDIPSEIKKLVGHSKALFLDRHMIIKNLSEFGMMNLEQLRVCMMSECKEMQTIVDGRHSNSNNDMLSHLLYLSVSYMKNLRSIWEGPNPPSSFLGMLKSLALHNCPNLTTVFTLDFLGNLSLLKELIVKECPKVTTLIKGSDGSSECEAKVFLPKLRKIILVHLPELINICNGLHIGPCLEIIGIYDCPKLQSLSKTELSSQSLKVIKGETKWWEALKWSEVDWGKACLPHKFDGLFSSVDIEDDMMTQLGVYMEDDNDSDNISAGGIVDDGYSWRKYGQKDILGSKFPKHSITTRWPFEDDGYTWRKYGQKDILGSKFPRSYYRCNHKFDKGCNAKKQVQSCDEDPTISSHTEPLQPFSDRMLKDQKQNADRRRITWSMMSKDLPDGTFDDDDDDGYKYPRGKQASNAVLDSFPSMDESVSTAASYGDSVITDLTQASSASKGIGSALGSETRRSRISMKFPDMNPTGKSPRRELQGPRPTPLRIHKDSHKIKKPPLPPQQPPQPQPPPRQPVIMVMHTTPGDFMDLVKCLTGCTSSSSSSSNMVSTSSNDPFNRNNGGDMVSPAARYASIEKARTPQGKKLGAADNNNNNIIGGGETQYLIFGILTEFTDDELMNFEKSKLHFFPFIKPPDLPEMEAVKSRLGHIKFQMQIVP 1394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2574 1394 MobiDBLite consensus disorder prediction 1104 1119 - -
Sto2g2574 1394 MobiDBLite consensus disorder prediction 1277 1297 - -
Sto2g2574 1394 MobiDBLite consensus disorder prediction 1235 1254 - -
Sto2g2574 1394 Gene3D WRKY domain 1000 1032 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto2g2574 1394 SUPERFAMILY WRKY DNA-binding domain 1034 1089 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto2g2574 1394 Gene3D - 298 370 IPR042197 -
Sto2g2574 1394 ProSiteProfiles WRKY domain profile. 1034 1086 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto2g2574 1394 MobiDBLite consensus disorder prediction 1277 1298 - -
Sto2g2574 1394 Gene3D Ribonuclease Inhibitor 477 721 IPR032675 -
Sto2g2574 1394 SUPERFAMILY WRKY DNA-binding domain 1006 1030 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto2g2574 1394 SMART WRKY_cls 1008 1038 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto2g2574 1394 SMART WRKY_cls 1039 1095 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto2g2574 1394 Gene3D Ribonuclease Inhibitor 732 957 IPR032675 -
Sto2g2574 1394 SUPERFAMILY L domain-like 485 937 - -
Sto2g2574 1394 Pfam WRKY DNA -binding domain 1009 1029 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto2g2574 1394 Pfam WRKY DNA -binding domain 1040 1088 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto2g2574 1394 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 402 IPR027417 -
Sto2g2574 1394 MobiDBLite consensus disorder prediction 1180 1255 - -
Sto2g2574 1394 MobiDBLite consensus disorder prediction 1104 1143 - -
Sto2g2574 1394 Gene3D WRKY domain 1033 1092 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto2g2574 1394 Pfam Leucine rich repeat 518 574 IPR001611 GO:0005515
Sto2g2574 1394 ProSiteProfiles WRKY domain profile. 1003 1029 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto2g2574 1394 PANTHER - 347 967 - -
Sto2g2574 1394 PANTHER PROTEIN LAP1-LIKE 347 967 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2574 Sto-Chr2 39358841 39366539 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g2574 1040 1085 WRKY Transcription Factor Family AT5G24110 67.391 5.30e-16 79.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto2g2574 LRR_8 1.6e-09 CL0022
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2574 - - aip:107622712 992.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g2574 2 39358841 39366539 Sto2g2574 2 39358841 39366539 ECH