Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2567 ttgattttattttttctgtatCAGTTTTGTGCAATGGGAAGAAAAAAGACAGAGGAGGCTGGCCCTGGCACAAAGGCTAAGCCAAGTGGCAAAGATGCTCCAAAGAAGGAAAAGCTATCTGTCTCAGCCATGCTGGCCAGCATGGATGAAAAACCTGATAAACCTAAGAAAGTTTCTTCGTCCTCGAGTAAGCCCAAGCCGAAATCTGCCCCAAAAGCTTCTGCATACACTGATGGTATTGATCTTCCTCCctctgAGGAGGACCAGCAAAATAATGTGTCTAAGAGGTCCACTCAGCAGCAGAGGCCTCTTGATGTAGCTATTTCAgataaagagttaaaaaaacgTGAAAAGAAGGATATTCTTGCTGCCCATGCTGCAGAGTTGGCCAAGAAGGAAGCACTTAGGGATGACCATGATGCTTTCACTGTGGTCATTGGAAGCCGTGCTTCAGTGCTTGATGGAGAGGATGACGCTGATGCTAATGTGAAAGATGTAACAATAGAAAACTTCTCTGTGGCAGCTCGAGGTAAAGAACTTCTGAAGAATGCATCAGTGAAGATATCTCATGGGAAGAGGTATGGTTTGGTTGGGCCCAATGGAAAGGGAAAGTCCACACTATTGAAGCTTCTTGCTTGGAGGAAGATACCAGTACCAAAGAATATTGATGTGCTTCTGGTTGAACAGGAGGTAGTGGGTGATGATAAAACTGCACTTGAAGCAGTTGTCTCAGCCAATGAAGAACTTGTTAGAACTCGTCAGGAAGTTGCTTTTCTGCAAAATGCAACTTCTGGTGAGGGAGGTGTAGACAAAGATGATAGTTATGAAGATGATGCAGGAGAGAAGCTTGCTGAGCTATATGAAAAATTACAGATTATGGGGTCAGATGCAGCTGAAGCTCAAGCATCGAAAATTCTAGCTGGTTTGGGTTTTACAAAGGATATGCAGGGTCGTGCTACGAAATCATTTAGTGGAGGATGGAGGATGAGAATTTCCTTGGCCAGAGCACTTTTTGTGCAGCCAACTTTGTTATTGCTTGATGAACCCACAAATCATCTTGATCTAAGGGCTGTTCTCTGGTTGGAGGAATACTTATGCCGATGGAAGAAGACTTTGGTTGTTGTCTCCCATGATAGGGATTTCCTTAATACAGTTTGCAATGAGATTATTCATCTGCATGATTTGAAACTCCATTTCTATCGAGGAAATTTTGATGATTTTGAAAGTGGTTATGAACAACGTCGTAAAGAGATGAATAAGAAGTATGAGATTTATGACAAGCAGATGAAAGCAGCTAAAAGGAGCGGGAACCGAGTTCAGCAGGAAAAGGTGAAGGATAGAGCCAAGTTTGCAGCTGCGAAGGAAGCATCAAAAAGCAAAGGCAAAGGCAAGGGTAaggttgatgatgatgaagccCCAGTAGATGTTCCACAAAAGTGGAGGGATTACAGTGTTGAGTTCCACTTTCCTGAACCTACTGAGCTGACACCCCCACTTCTGCAGCTTATTGAAGTTAGCTTCAGCTACCCAAATAGGGAGGATTTTAGACTCTCAAATGTTGATGTTGGTATTGATATGGGTACTCGTGTCGCCATTGTTGGGCCTAATGGAGCTGGGAAATCTACACTCCTGAATCTTCTTGCTGGTGATTTGGTTGCATCTGAGGGCGAAGTTAGAAGAAGTCAGAAGTTGAGAATCGGAAGATATTCCCAGCACTTCGTAGACCTCCTAACAATGGACGAAACACCAGTTCAGTATCTTCTACGTCTCCATCCGGACCAGGAGGGACTGAGCAAGCAGGAGGCTGTTCGTGCAAAACTCGGTAAATTTGGTCTTCCCAGCCATAACCACCTTACCCCTATTGCCAAACTATCAGGAGGGCAGAAAGCTCGGGTGGTCTTCACATCGATATCCATGTCAAAGCCCCACATCTTGCTGTTGGACGAACCCACGAATCATCTGGATATGCAAAGTATCGATGCATTAGCCGACGCGTTGGATGAATTCACTGGTGGAGTTGTTCTAGTTAGTCATGATTCTAGATTGATATCACGTGTATGTGAGGATGAAGAAAGGAGTCAAATCTGGGTAGTTGAGGATGGAACTGTCAAAACTTTTGATGGAAGCTTTGAGGATTACAAGGACGAGTTGCTGAAAGAAATTAAAGCTGAGGTTGATGATTGA 2184 0.429 LILFFLYQFCAMGRKKTEEAGPGTKAKPSGKDAPKKEKLSVSAMLASMDEKPDKPKKVSSSSSKPKPKSAPKASAYTDGIDLPPSEEDQQNNVSKRSTQQQRPLDVAISDKELKKREKKDILAAHAAELAKKEALRDDHDAFTVVIGSRASVLDGEDDADANVKDVTIENFSVAARGKELLKNASVKISHGKRYGLVGPNGKGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDKTALEAVVSANEELVRTRQEVAFLQNATSGEGGVDKDDSYEDDAGEKLAELYEKLQIMGSDAAEAQASKILAGLGFTKDMQGRATKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCNEIIHLHDLKLHFYRGNFDDFESGYEQRRKEMNKKYEIYDKQMKAAKRSGNRVQQEKVKDRAKFAAAKEASKSKGKGKGKVDDDEAPVDVPQKWRDYSVEFHFPEPTELTPPLLQLIEVSFSYPNREDFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVASEGEVRRSQKLRIGRYSQHFVDLLTMDETPVQYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCEDEERSQIWVVEDGTVKTFDGSFEDYKDELLKEIKAEVDD 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2567 727 Coils Coil 242 262 - -
Sto2g2567 727 MobiDBLite consensus disorder prediction 16 111 - -
Sto2g2567 727 PANTHER - 16 727 - -
Sto2g2567 727 MobiDBLite consensus disorder prediction 84 105 - -
Sto2g2567 727 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 166 419 IPR003439 GO:0005524
Sto2g2567 727 Coils Coil 415 435 - -
Sto2g2567 727 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 500 725 IPR003439 GO:0005524
Sto2g2567 727 Pfam ABC transporter 517 652 IPR003439 GO:0005524
Sto2g2567 727 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 479 714 IPR027417 -
Sto2g2567 727 SMART AAA_5 526 702 IPR003593 -
Sto2g2567 727 SMART AAA_5 190 395 IPR003593 -
Sto2g2567 727 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 16 727 - -
Sto2g2567 727 CDD ABCF_EF-3 500 702 - -
Sto2g2567 727 Gene3D - 470 726 IPR027417 -
Sto2g2567 727 CDD ABCF_EF-3 166 396 - -
Sto2g2567 727 MobiDBLite consensus disorder prediction 450 473 - -
Sto2g2567 727 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 166 425 IPR027417 -
Sto2g2567 727 Pfam ABC transporter 181 351 IPR003439 GO:0005524
Sto2g2567 727 ProSitePatterns ABC transporters family signature. 323 337 IPR017871 GO:0005524
Sto2g2567 727 Gene3D - 163 448 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2567 Sto-Chr2 39314365 39316578 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g2567 500 703 Calmodulin-binding Proteins AT2G36910 27.803 4.78e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2567 K06184 - gmx:100806226 1172.15