Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2566 ATGGAGAAATTACGAGAGGAAGACATGGGAGTTCACAGAGGAGAAAGAGGAGCTCAGGTTCTTGCTGGTTGGCCTTCATGGCTCACTAGTGTTGCAGGGGAAGCCATTAGTGGTTGGATTCCACGTAGAGCTGATTCCTTTGAGAAGTTGGAGAAgATTGGACAAGGAACATATAGCAGCGTATACAAAGCACGAGATCTAGAAACAAACAAAATAGTTGCATTGAAGAAGGTCCGATTCACCAATATGGATCCAGAAAGTGTTCGATTCATGGCCAGAGAAATAATCATTCTTCGAAGGCTTGATCATCCAAATGTGATGAAGCTTGAAGGCATGATCACTTCTAGGGTTTCTGGAAGCTTGTATCTTGTATTTGAATACATGGAACATGATCTCGCAGGCCTTTCTGCACTTCCAGGCGTCAAGTTTTCAGAAGAAcagCTAGCAATTTTGAGAGTGCAGATAAAGTGctacatgcaacaaatattgAAGGGTCTAGACCATTGTCACAGAAAGGGGGTTCTTCACAGAGACATAAAGGGGTCGAATCTGCTAGTAGATAATAATGGGAAGCTGAAGATAGGAGACTTTGGATTAGCAACAATAGTAGAAAGAAGTTGTAGTAATAAAGAGCAAGCATTAACTAGCAGAGTGGTAACGTTATGGTACCGATCACCTGAACTTTTACTTGGAGCCACACATTATGGCGCTGCTATTGACTTGTGGAGTACTGGTTGCATTCTTGCAGAGTTGTTTGCTGGCAATCCCATTATGCCTGGACGCACTGAGgtGGAGCAACTCCATAAAATCTTCAAACTATGTGGATCTCCCTCAGAAAGATACTGGAAGAAGTCAAAGCTACCACATGCGACAATATTCAAACCTCAGCAACCTTACAAGCGTGTGGTTTCTGAGACATTCAAGGATTTTCCAGAATCTGCACTCAAACTTTTGGATGTTCTTCTTGCCATAGAACCTGAGGATCGAGGAACTGCTGCTTCAGCACTTCACAGCGAGTTCTTCACGACAGAGCCCTATCCTTGTGATCCATCAGTTTTGCCAAAGTACCCACCAAGTAAGGAGTTTAATGTCAAACTTAGAGAAGAGAGAAGTAGAAGGAGAAGAGCTGCTGCTAACAAAGCAAATGAAGAAGGATCAAAGAGTACTTCTAAAAAATCTAAAGCTGCCCCACCACCTGATGCCAAGCCTGAATTGCCAGCTTCCACTGAGAAGAAAAAATCACAGACGACAAATCCTAAACAAAACGACGACGACAACAACATTAAGAATCCAGAAAAGGACATAGGAATTGCAGCTACAAAATCAACAATAACATCCAAACTCATCCCTCACTCATGCCAACCTAGGCATCACCCAAGTGTACATGCATACAGACGCAACAACAATATTATGAACTTGAACGAAGAAGAATTAGAGGTTTTTGCTTCAGATGAGAGGTTTGGTGCAAGATATGTACATAGTCATGTGGGCACTACTACAACAAAAGAATCTAATACATTTCTAGATAATCCCTCCAACAAGTCTAATTACAAGGACTTTCATCCTTTTGCCAAGAAGACTACTATGGGCTATGCTGGGAGAAATGGAAACATGCAGTATTCAGGACCCATGGCCTCTCGAGAAGGAAATATTGGAGAAATGCTTAAGCACCACGAAAGACAAATCCAAAATGCTGTCCGCAAAGCTTGTTTTGATAATAAGGAGATCTCAGTGACATCTAGGGTTTTGGAGAAGAAATCACCCTGCAATTTCCTAGTCTTTGGCCTAGGCCATGACAGCCTAATGTGGAGTTCCCTCAACCACAACGGCCGGACCGTTTTCCTCGAGGAAGACGAGGCGTGGATCGAGCAAATCCGGCGCCGGTTCCCCGGGCTCGAGTCCTACCACGTGACCTACAACAGCAAGGTGAATGAGGCTGAGAATCTAATGGATGTAGGGAAAGGGCCAGAGTGTACAGCATTGGGAAACCCTAGATTCTCAATGTGCCAACTTGCACTGAAGGGATTGCCTAGTGAGGTTTATGAGACACAATGGGATTTGATAATGGTGGATGCACCAACTGGGTATTATGAGGAAGCTCCAGGGAGGATGACTGCTATATATACTGCAGGAATGATGGCTAGGAATAGGGAGAATGGTGGGGAAACTCATGTGTTTGTGCATGATGTGAATAGGGTTGTGGAAGATAAGTTTTCTAAGGCTTTCTTGTGTGAGAAGTATATGAAGAAACAAGAAGGGAGACTGAGGCATTTCTTAATTCCTAGCCATAGGGATGACTTGAACAGACCTTTTTGTCCTGAGGAAGATTAG 2331 0.4303 MEKLREEDMGVHRGERGAQVLAGWPSWLTSVAGEAISGWIPRRADSFEKLEKIGQGTYSSVYKARDLETNKIVALKKVRFTNMDPESVRFMAREIIILRRLDHPNVMKLEGMITSRVSGSLYLVFEYMEHDLAGLSALPGVKFSEEQLAILRVQIKCYMQQILKGLDHCHRKGVLHRDIKGSNLLVDNNGKLKIGDFGLATIVERSCSNKEQALTSRVVTLWYRSPELLLGATHYGAAIDLWSTGCILAELFAGNPIMPGRTEVEQLHKIFKLCGSPSERYWKKSKLPHATIFKPQQPYKRVVSETFKDFPESALKLLDVLLAIEPEDRGTAASALHSEFFTTEPYPCDPSVLPKYPPSKEFNVKLREERSRRRRAAANKANEEGSKSTSKKSKAAPPPDAKPELPASTEKKKSQTTNPKQNDDDNNIKNPEKDIGIAATKSTITSKLIPHSCQPRHHPSVHAYRRNNNIMNLNEEELEVFASDERFGARYVHSHVGTTTTKESNTFLDNPSNKSNYKDFHPFAKKTTMGYAGRNGNMQYSGPMASREGNIGEMLKHHERQIQNAVRKACFDNKEISVTSRVLEKKSPCNFLVFGLGHDSLMWSSLNHNGRTVFLEEDEAWIEQIRRRFPGLESYHVTYNSKVNEAENLMDVGKGPECTALGNPRFSMCQLALKGLPSEVYETQWDLIMVDAPTGYYEEAPGRMTAIYTAGMMARNRENGGETHVFVHDVNRVVEDKFSKAFLCEKYMKKQEGRLRHFLIPSHRDDLNRPFCPEED 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2566 776 ProSiteProfiles Protein kinase domain profile. 47 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g2566 776 Gene3D Phosphorylase Kinase; domain 1 42 137 - -
Sto2g2566 776 MobiDBLite consensus disorder prediction 410 424 - -
Sto2g2566 776 ProSitePatterns Protein kinases ATP-binding region signature. 53 76 IPR017441 GO:0005524
Sto2g2566 776 MobiDBLite consensus disorder prediction 351 432 - -
Sto2g2566 776 CDD STKc_CDK9_like 47 341 - -
Sto2g2566 776 PANTHER KINASE CDK9, PUTATIVE-RELATED 10 573 - -
Sto2g2566 776 SMART serkin_6 47 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g2566 776 PANTHER CELL DIVISION PROTEIN KINASE 10 573 - -
Sto2g2566 776 TIGRFAM A_thal_3515: uncharacterized plant-specific domain TIGR01627 572 772 IPR006514 GO:0045492
Sto2g2566 776 SUPERFAMILY Protein kinase-like (PK-like) 41 349 IPR011009 -
Sto2g2566 776 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
Sto2g2566 776 Pfam Protein kinase domain 47 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g2566 776 Gene3D Transferase(Phosphotransferase) domain 1 138 381 - -
Sto2g2566 776 Pfam Polysaccharide biosynthesis 574 758 IPR021148 -
Sto2g2566 776 MobiDBLite consensus disorder prediction 361 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2566 Sto-Chr2 39300078 39311733 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g2566 39 380 Core Cell Cycle Gene Families AT5G10270 49.721 2.28e-110 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Sto2g2566 Pkinase 3.1e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2566 - - aip:107638508 660.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g2566 2 39300078 39311733 Sto2g2566 2 39300078 39311733 ECH