Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2557 atGGCGTCTGCTAGCCTTGGAAATGGTGGGGTCGGCAGTTCCAGGTCTGTTAATGGCTTCAGGGGTTCTTCTAGTTCAGTGGATTGGCTTGGGAGAGAGATGCTTGAGTTGAGGTTGAGGGAGGACAAGGTGGACCAGGATGAGGATAGAGATAGTGAGCCTGACATCATTGATGGTGTGGGTGCTGAAACTGGACATGTGATAAGAACCAGCATTGGTGGTCGAAATGGCCAATCTAAGCAGAATATCAGTTATATTGCGGAACATGTGGTTGGAACGGGCTCTTTTGGTGTTGTTTTTCAAGCAAAATGCAGAGAAACTGGAGAGATTGTAGCCATTAAAAAGGTTCTCCAGGACAAGCGTTACAAAAATAGGGAGTTacagattatgcaaatgctggACCATCCAAATATTGTTGCCCTTAGGCATTGTTTCTTTTCAACAACTGACAAAGAAGAGGTTTACCTGAATCTTGTACTTGAATATGTTCCTGAAACTGTTAATCGTATCGCGAGGAATTATAGCAGGATCAACCAGCGAATGCCTTTAATATATGTTAAGCTTTACACATACCAGATTTGCAGGGCCCTTGCTTATATACATAATTGCATTGGAATATGCCATCGTGACATCAAACCTCAGAACCTACTTGTGAACCCACACACACATCAGCTGAAAATTTGTGATTTTGGAAGTGCAAAAGTGTTGGTGAAAGGAGAACCAAATGTTTCTTACATCTGTTCAAGATACTATCGTGCCCCGGAACTTATTTTTGGTGCCACCGAGTATACAACTGCAATAGACATATGGTCAACTGGATGTGTAATGGCTGAACTACTTCTTGGACAGCCTTTGTTTCCTGGAGAAAGTGGAGTTGACCAACTAGTTGAAATCATTAAGGTTTTGGGGACTCCAACCAGGGAGGAGATAAAGTGCATGAACCCGAATTATACTGAATTTAAGTTTCCGCAGATTAAACCTCATCCATGGCACAAGGTCTTTCAGAAGCGTTTACCCCCAGAAGCCGTGGACCTTGTCTGTAGGTTCTTTCAGTACTCTCCCAATTTGCGATGCACTGCACTGGAAGCATGCATTCATCCATTCTTTGATGAATTGAGGGATCCCAACACCCGCCTTCCTAATGGCCGGCCACTTCCtccactttttaattttaaagctGCCGAGCTTTCGGGTATACCGCCTGACATCATCAATCGACTTATTCCGGAGCATGCTCGTAAGCAGAACTTATTTATGGCTTTGCATGCCTAG 1272 0.4269 MASASLGNGGVGSSRSVNGFRGSSSSVDWLGREMLELRLREDKVDQDEDRDSEPDIIDGVGAETGHVIRTSIGGRNGQSKQNISYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALRHCFFSTTDKEEVYLNLVLEYVPETVNRIARNYSRINQRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLLVNPHTHQLKICDFGSAKVLVKGEPNVSYICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACIHPFFDELRDPNTRLPNGRPLPPLFNFKAAELSGIPPDIINRLIPEHARKQNLFMALHA 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2557 423 PANTHER SHAGGY-RELATED PROTEIN KINASE DELTA-RELATED 1 420 - -
Sto2g2557 423 SUPERFAMILY Protein kinase-like (PK-like) 85 396 IPR011009 -
Sto2g2557 423 MobiDBLite consensus disorder prediction 1 25 - -
Sto2g2557 423 Gene3D Transferase(Phosphotransferase) domain 1 165 413 - -
Sto2g2557 423 ProSitePatterns Protein kinases ATP-binding region signature. 91 115 IPR017441 GO:0005524
Sto2g2557 423 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 1 420 - -
Sto2g2557 423 Pfam Protein kinase domain 87 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g2557 423 CDD STKc_GSK3 80 372 IPR039192 -
Sto2g2557 423 ProSiteProfiles Protein kinase domain profile. 85 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g2557 423 Gene3D Phosphorylase Kinase; domain 1 70 164 - -
Sto2g2557 423 SMART serkin_6 85 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g2557 423 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2557 Sto-Chr2 39229440 39234778 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g2557 91 377 Core Cell Cycle Gene Families AT1G76540 35.254 6.09e-58 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Sto2g2557 Pkinase 7.5e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2557 K03083 - jre:108983720 803.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g2557 2 39229440 39234778 Sto2g2557 2 39229440 39234778 ECH