Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2549 CTGGCCACATGGGACTCCTCGAATTCAAGCTCGGTTTGTTCTTCGTGGGTTGGAATTCAGTGCCACCGTGGTCGTGTCGTGTCGGTGGACTTGACGGATTTGAATCTCTATGGCTCTGTTTCTCCTTCAATTTCAAGGCTTGATCGGCTCACACACCTCTCACTTGCAGGAAACAACTTCACGGGCAGCATTGAGATCACTAATGGCTGGAGTAGCCTTCGGTTTCTGAACATCTCCAACAACCAGTTTAGTGGGACTTTGGATCATTGGAACTACTCTGCCATGGAAGAGTTGGGAGTTATTGATGCTTACAACAACAACTTCACTGCCCTGCTTCCAATGGGGGTTCTGAGGTTGAAGAAGCTCAGGTACTTGGATCTTGGTGGGAATTATTTCTATGGAGGAATCCCGGAAAGTTATGGAGATTTGGTGGGGTTGGAGTATCTCTCACTATCAGGGAATGATCTTAGAGGGAGAATCCCAGGTGAGTTGGGGAATCTTAGTAACTTAAGGGAGATTTACTTGGGGTATTTCAACTCTTTTGAAGGTGGGATTCCAATGGAGTTTGGGAAGTTGGTGAGTTTGGTTCACATGGATCTTTCGAGTTGTGATTTGGATGGTTCGATTCCGAAAGAATTGGGAAACTTGGTGGAGCTTGATACTCTTTACTTGTACAATAATCAGCTGATTGGGTCCATACCAAAACAACTAGGCAACTTGACCAAGTTGGTGAACCTTGATCTTTCTAGAAATGCACTCACTGGGGAAATTCCGTTTGAGTTCATCAATCTCAAGCAGCTCCAGCTTTTCAATCTCTTCTTGAATAGATTGCATGGATCCATACCAGACTACATTGCAGAGTTGCCAAATTTGGAGACACTTCAGCTATGGATGAACAATTTCACAGGAGAAATACCCCAGAATCTTGGCGTCAATGGGAAGCTTCAAGTACTTGATTTGTCCTCCAACAAGCTCACTGGTATTATCCCACCTCAACTTTGTTCCGCAAACCAGCTTAGAATTCTAATTCTTCTAAATAATTTCCTCTTTGGTCCCATACCTGAAGGTCTAGGTACATGTTTCAGTCTCACTAGAGTAAGGTTAGGACAGAACTACCTCAATGGTAGCATTCCCAATGGTTTTCTTTACCTTCCTAAGCTAAATTTAGCAGAGTTGCAAAACAACTACTTGTCAGGAAACTTGTCAGAGAATGACAATAGTTCTTCTCAACCTGTTAACTTAGGCCAGCTCAACTTGTCAAACAATGGCTTATCTGGTCCTTTACCTCATTCACTCTCAAATTTCTCTTCCATTCAGATGCTTTTACTTAGTGGAAACCAATTCTCAGGTCCCATCCCTCCGTCCATTGGAGATCTTCGTCAAGTTCTAAGGCTTGATCTAAGTAGAAACTCATTTTCTGGGGTAATTCCACCTGAAATTGGGAACTGTTTCCATCTCACTTACCTTGACATAAGCCAGAACAATCTCTCTGGATCAATCCCAAATGAGATTTCCAATATCCACATCCTGAATTACTTGAACTTGTCAAGAAACCACTTGAATGAACCCATCCCAAAATCCATTGGCAACATGAAGAGCCTCACCATTGCTGATTTCTCCTTCAACGAGTTGTCTGGAAAATTGCCAGAAACAGGGCAGTTTGCCTTCTTCAATGCTTCATCTTTTGCGGGCAATCCTCAACTATGTGGTTCTCTCCTGAACAACCCTTGCAATTTCACCACAATCACAAACCCACCTGGGAAAAACCCTACAGATATCAAGCTCATCTTCGCTCTTGGCCTTCTAATTTGCTCCCTAGTCTTCGCTATTGCAGCCATAATCAAAGCCAAATCATTCAGAAAGAAAGGCCCTAGTTCGTGGAAAATGACAGCATTCCAAAAACTCGATTTCAAAATCTCCGACGTTCTCGAATGTGTCAAGGATGGCAATGTGATCGGAAGAGGCGGCGCGGGGATCGTTTACCACGGAAAAATGCCAAACGGCGTGGAGATCGCAGTGAAGAAACTCCTAGGGTTCGGCGCTAACAGCCACGACCACGGATTCCGAGCAGAAATTCAAACCCTAGGCAACATCAGGCATAGGAACATCGTGCGATTAATAGCATTCTGCTCCAACAAAGAGACGAACCTTCTCGTTTATGAGTACATGCGGAACGGGAGCCTGGGCGAGGCGTTGCACGGGAAGAAAGGGGCGTTTCTAGGGTGGAATTTGAGGTACAAGATCGCCATCGATTCCGCCAAAGGTCTCTGCTACCTCCACCACGATTGCTCACCCTTGATCGTTCATCGAGACGTGAAATCCAACAACATTCTCTTGAATTCCAGCTTCGAAGCACACGTTGCGGATTTTGGACTCGCCAAGTTCTTGATCGATAGTGGAAATTCTGAGTATATGTCCACCATTGCAGGCTCCTATGGCTACATTGCCCCTGAATATGCCTACACATTACGCGTGGACGAAAAGAGCGATGTCTATAGCTTCGGAGTAGTGTTGTTGGAGCTGATAACCGGGCGGAGGCCGGTCGGGGATTTCGGGGACGGCGTGGATCTTGTTCAGTGGTGCAAGAAGGCGACGAACGGGAGAAAAGAAGAAGTGATGAACATAGTTGATTTGAGGCTCACATTGGTGCCTAATAAGGAGGAAGCAATGCACATGTTGTTCATAGCTATGTTGTGCTTGCAAGAGAATAGTGTTGTGAGGCCAACCATGAGAGAAGTAGTTCAAATGCTCACAGAATTCCCTCATCATCATAACCCTAATTCCTTATTATCCCCACAACAACAACAAGAAGAAGAGGAATAtcacaacaataacaataataataatcaatctTCTTCCTCTAATTATCACCCACCAAGCAAGAGCCTTGAGAAAGAAAAGCCTTGTCCTCCCACTTTCAAACAAGACCTTTTGGTTTAA 2940 0.4439 LATWDSSNSSSVCSSWVGIQCHRGRVVSVDLTDLNLYGSVSPSISRLDRLTHLSLAGNNFTGSIEITNGWSSLRFLNISNNQFSGTLDHWNYSAMEELGVIDAYNNNFTALLPMGVLRLKKLRYLDLGGNYFYGGIPESYGDLVGLEYLSLSGNDLRGRIPGELGNLSNLREIYLGYFNSFEGGIPMEFGKLVSLVHMDLSSCDLDGSIPKELGNLVELDTLYLYNNQLIGSIPKQLGNLTKLVNLDLSRNALTGEIPFEFINLKQLQLFNLFLNRLHGSIPDYIAELPNLETLQLWMNNFTGEIPQNLGVNGKLQVLDLSSNKLTGIIPPQLCSANQLRILILLNNFLFGPIPEGLGTCFSLTRVRLGQNYLNGSIPNGFLYLPKLNLAELQNNYLSGNLSENDNSSSQPVNLGQLNLSNNGLSGPLPHSLSNFSSIQMLLLSGNQFSGPIPPSIGDLRQVLRLDLSRNSFSGVIPPEIGNCFHLTYLDISQNNLSGSIPNEISNIHILNYLNLSRNHLNEPIPKSIGNMKSLTIADFSFNELSGKLPETGQFAFFNASSFAGNPQLCGSLLNNPCNFTTITNPPGKNPTDIKLIFALGLLICSLVFAIAAIIKAKSFRKKGPSSWKMTAFQKLDFKISDVLECVKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGANSHDHGFRAEIQTLGNIRHRNIVRLIAFCSNKETNLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIDSAKGLCYLHHDCSPLIVHRDVKSNNILLNSSFEAHVADFGLAKFLIDSGNSEYMSTIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELITGRRPVGDFGDGVDLVQWCKKATNGRKEEVMNIVDLRLTLVPNKEEAMHMLFIAMLCLQENSVVRPTMREVVQMLTEFPHHHNPNSLLSPQQQQEEEEYHNNNNNNNQSSSSNYHPPSKSLEKEKPCPPTFKQDLLV 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2549 979 SMART LRR_typ_2 143 167 IPR003591 -
Sto2g2549 979 SMART LRR_typ_2 288 312 IPR003591 -
Sto2g2549 979 SMART LRR_typ_2 313 336 IPR003591 -
Sto2g2549 979 SMART LRR_typ_2 459 483 IPR003591 -
Sto2g2549 979 SMART LRR_typ_2 216 240 IPR003591 -
Sto2g2549 979 ProSiteProfiles Leucine-rich repeat profile. 314 335 IPR001611 GO:0005515
Sto2g2549 979 SUPERFAMILY RNI-like 28 374 - -
Sto2g2549 979 Gene3D Ribonuclease Inhibitor 1 93 IPR032675 -
Sto2g2549 979 Gene3D Transferase(Phosphotransferase) domain 1 723 949 - -
Sto2g2549 979 MobiDBLite consensus disorder prediction 922 979 - -
Sto2g2549 979 Pfam Leucine Rich Repeat 314 334 IPR001611 GO:0005515
Sto2g2549 979 Pfam Leucine rich repeat 121 177 IPR001611 GO:0005515
Sto2g2549 979 Pfam Leucine rich repeat 464 520 IPR001611 GO:0005515
Sto2g2549 979 PANTHER UNNAMED PRODUCT 1 924 - -
Sto2g2549 979 MobiDBLite consensus disorder prediction 922 959 - -
Sto2g2549 979 Gene3D Ribonuclease Inhibitor 277 580 IPR032675 -
Sto2g2549 979 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE BAM3 1 924 - -
Sto2g2549 979 Gene3D Ribonuclease Inhibitor 179 276 IPR032675 -
Sto2g2549 979 Gene3D Ribonuclease Inhibitor 94 178 IPR032675 -
Sto2g2549 979 ProSitePatterns Serine/Threonine protein kinases active-site signature. 767 779 IPR008271 GO:0004672|GO:0006468
Sto2g2549 979 ProSiteProfiles Protein kinase domain profile. 646 921 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g2549 979 SMART serkin_6 646 895 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g2549 979 Pfam Protein tyrosine and serine/threonine kinase 649 917 IPR001245 GO:0004672|GO:0006468
Sto2g2549 979 SUPERFAMILY L domain-like 313 570 - -
Sto2g2549 979 Gene3D Phosphorylase Kinase; domain 1 611 722 - -
Sto2g2549 979 SUPERFAMILY Protein kinase-like (PK-like) 636 918 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2549 Sto-Chr2 39153632 39159762 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g2549 1 933 Receptor kinase-like Gene Family AT5G65700 58.281 0.0 1062
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sto2g2549 PK_Tyr_Ser-Thr 1.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2549 - - rcu:8263279 1493.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g2549 2 39153632 39159762 Sto2g2549 2 39153632 39159762 ECH