Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2547 ATGGATGGATCAACTGGCCGAGGCATCAATGGTGTGGATAATTTCTTACAAAATTACAAGTTGGGAAAAACACTTGGCCATGGAGCCTTTGGCAAGGTTAAAATTGCAGAGCATGTATTAACTGGCCATAAAGTTGCCATTAAGATCCTTAACCGGCGCAAGATAAAGGGCATGGAAATGGAAGATAAAGTgagaagagaaatcaaaattttaagattGTTCATGCATCCTCACATCATACGACTTTACGAGGTCATAGAAACCCCAACAGACATATATGTTGTTATGGAGTATGTAAAATCTGGGGAGCTCTTTGATTACattgtagaaaaaaatagaCTGCAAGAAGATGAAGCCCGCAAGTTTTTCCAGCAGGTTATATCTGGAAAACAGTATGCTGGACCAGAAGTAGATGTCTGGAGCTGTGGTGTAATTTTATATGCTCTTCTTTGTGGCACTCTTCCATTTGATGATGAAAATATCCCAAACCTTTTTAGGAAAATAAAGGGTGGGATTTATACTCTTCCTAGTCATCTATCACCTGGTGCTAGAGATATGATACCAAGGATGCTTGTAGTTGATCCTATGAAGAGGATGACCATACGTGATATCCGCCAACATCCATGGTTCCAAATTCGTCTCCCCCGTTATCTAGCAGTGCCGCCACCAGATACAATGCATCAAGCCAAAAAGattgACGAGGAAATTCTTCAAGAAGTGGTTAATATGAGATTTGACAGGAACCAACTGGTTGAATCTCTCCGCAACCGTATGCAAAATGAGGGTACTGTTGCATACTATTTGTTATTAGACAATCGATCTCGTGTATCTGGTGGTTATCTTGGAGCTGAGTTTCAAGAGACAGTGGATTTTGGTCTTAACCGCATTCATCCCAGTGAAGTTGCTGCTCCAGCTGTTGGTCACCGCTTTCCAGGTTATATGGATTATCAAGGAGTAGGATTGAGACAACACTTCCCTGTTGAGAGAAAATGGGCCCTTGGGCTTCAGTCTCGCGCTAATCCTCGGGAAATAATGACTGAGGTGCTTAAAGCTTTGCAAGAGTTGAATGTGTGTTGGAAAAAGATTGGACACTACAACATGAAGTGCAGGTGGGTTGCTGGCATTCCTGGTTATCCAGATGGAATGGTTGACAATACTTTGTACAGTAATCTTTACTACAGAGACGATTCCACCATTATTGAAAGTGATGCTGGCTCTAAGTCAAATGTCGTCAAGTTTGAAGTTCAGCTTTACAAAACTAAGGAGGAGAAATATCTGCTTGATCTTCAAAGGGTGCAGGGCCCACAGTTCCTATTTCTGGATCTTTGTGCTGCTTTCCTTCAGCAGCTTCGTGTCCTTTAG 1362 0.4097 MDGSTGRGINGVDNFLQNYKLGKTLGHGAFGKVKIAEHVLTGHKVAIKILNRRKIKGMEMEDKVRREIKILRLFMHPHIIRLYEVIETPTDIYVVMEYVKSGELFDYIVEKNRLQEDEARKFFQQVISGKQYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFRKIKGGIYTLPSHLSPGARDMIPRMLVVDPMKRMTIRDIRQHPWFQIRLPRYLAVPPPDTMHQAKKIDEEILQEVVNMRFDRNQLVESLRNRMQNEGTVAYYLLLDNRSRVSGGYLGAEFQETVDFGLNRIHPSEVAAPAVGHRFPGYMDYQGVGLRQHFPVERKWALGLQSRANPREIMTEVLKALQELNVCWKKIGHYNMKCRWVAGIPGYPDGMVDNTLYSNLYYRDDSTIIESDAGSKSNVVKFEVQLYKTKEEKYLLDLQRVQGPQFLFLDLCAAFLQQLRVL 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2547 453 SUPERFAMILY Protein kinase-like (PK-like) 16 224 IPR011009 -
Sto2g2547 453 ProSitePatterns Protein kinases ATP-binding region signature. 25 48 IPR017441 GO:0005524
Sto2g2547 453 ProSiteProfiles Kinase associated domain 1 (KA1) profile. 404 452 IPR001772 -
Sto2g2547 453 CDD AMPKA_C 328 450 - -
Sto2g2547 453 SUPERFAMILY KA1-like 267 452 IPR028375 -
Sto2g2547 453 Gene3D Kinase associated domain 1, KA1 334 451 - -
Sto2g2547 453 ProSiteProfiles Protein kinase domain profile. 19 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g2547 453 CDD UBA_SnRK1_plant 232 272 - -
Sto2g2547 453 Pfam Kinase associated domain 1 410 452 IPR001772 -
Sto2g2547 453 PANTHER SERINE/THREONINE KINASE 126 452 - -
Sto2g2547 453 PANTHER SERINE/THREONINE KINASE 8 132 - -
Sto2g2547 453 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 8 132 - -
Sto2g2547 453 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 126 452 - -
Sto2g2547 453 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 231 271 IPR015940 -
Sto2g2547 453 Pfam Protein kinase domain 19 132 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g2547 453 Gene3D Transferase(Phosphotransferase) domain 1 130 280 - -
Sto2g2547 453 Gene3D Transferase(Phosphotransferase) domain 1 10 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2547 Sto-Chr2 39135184 39139291 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g2547 19 212 CBL-interacting serine-threonine protein kinases AT5G35410 34.766 2.26e-49 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Sto2g2547 Pkinase 3.1e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2547 K07198 - gmx:547544 580.482