Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2537 ATGTCCGGCAGAAACACCAACCTTCCGGCGACATTTGAGCAAGAGGTGTTCTACAAGGAGTGCCGGCGCAACCATGCAGCCGCCCTCGGCCGCGTCGCCTTCGACGGCTGTCATGGCTTTGTCAAGCCGGCCGCCGGCGTCGCCACTGTGGACGCCATGCTCTGCCTTGCATGCGGCTGCCACCGCAACTTCCACCACAAGGACACCGTCTACCACCCCATCCTGACCGCCACTACCACCCCCAccccccaccaccaccaccaccagccGGAATTCCCTGCAGCGGCGGGAGCGGGAGGGCCGTCGTCGGGGAGGACAACCCGAGTTGTCCAGCTCATCGACCGGCGCGAGACCATGACAACCATGCACGCTCCTcctcctccgccgccgccgccacccgcgggaaacaacaacaacaacaccGCTGCTGGGGTGGTGGCGGGGGCGGAGGAGATGCCGCCGCCTCCGGacgggaggaggaggaggacgaTGTTCACGGCGGAGCAGCGGAACCGGATGGTTCGGTTCGCGGAGAGGCTGGGTTGGAAGCCTCAGAGAGGAGACAAGGAAGAGATTCATCACTTCTGCATGGACATGGGAATCAGCCGCCGGATGTTCCTCGTGTGGCTCAGCAACAACCGCCCTAAGGAAGAATGGCGTAAATGCACACACATTAAAGAATCTGTTCAAAGGATGAGATTTGGAGAATTACAAAACATCATGGGTGTTGGTAGTCGCATTTCCTCACCCACCCTCTTGATTCTGagaaccaaacacacccttaaactAGTTGAATCAGGAGGATTGGTGGGCATGGGAGGCAGACCCAAAAGGTTTCTGGAGACGCATTTGGAAGAGCCCGGTTTAACTTATGGCATGGAAAGGgatcaagaataa 897 0.505 MSGRNTNLPATFEQEVFYKECRRNHAAALGRVAFDGCHGFVKPAAGVATVDAMLCLACGCHRNFHHKDTVYHPILTATTTPTPHHHHHQPEFPAAAGAGGPSSGRTTRVVQLIDRRETMTTMHAPPPPPPPPPAGNNNNNTAAGVVAGAEEMPPPPDGRRRRTMFTAEQRNRMVRFAERLGWKPQRGDKEEIHHFCMDMGISRRMFLVWLSNNRPKEEWRKCTHIKESVQRMRFGELQNIMGVGSRISSPTLLILRTKHTLKLVESGGLVGMGGRPKRFLETHLEEPGLTYGMERDQE 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2537 298 MobiDBLite consensus disorder prediction 120 142 - -
Sto2g2537 298 ProSiteProfiles 'Homeobox' domain profile. 156 220 IPR001356 GO:0003677
Sto2g2537 298 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 159 214 IPR006455 -
Sto2g2537 298 SUPERFAMILY Homeodomain-like 153 217 IPR009057 -
Sto2g2537 298 Pfam ZF-HD protein dimerisation region 16 69 IPR006456 -
Sto2g2537 298 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 18 68 IPR006456 -
Sto2g2537 298 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 13 214 - -
Sto2g2537 298 MobiDBLite consensus disorder prediction 78 105 - -
Sto2g2537 298 MobiDBLite consensus disorder prediction 122 136 - -
Sto2g2537 298 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 18 68 IPR006456 -
Sto2g2537 298 Gene3D - 148 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2537 Sto-Chr2 38991365 38997250 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g2537 16 214 ZF-HD Transcription Factor Family AT2G02540 30.769 1.91e-28 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Sto2g2537 ZF-HD_dimer 1.3e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2537 - - sita:101775363 123.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g2537 2 38991365 38997250 Sto2g2537 2 38991365 38997250 ECH