Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2517 ATGTCTGCCTCCGATTGGGGTTATGATCTGCTCTACACAGACTTACCTCTTTCTTTCTGTACCGTATTTGGTGTCCAATCAGTGATATCCACGTCAGCTAACTTTGAACAAGTGAAGAGGGTGAAGGTATCGATACACAACTTCCAACTATACCGGCACGTAGAGAATCCCGGATGGAAGTTAAGTTGGGTGTGGAAAGGCGACGAGGTGATATGGAAAATGTGGGGAGCTGAGGCCATAGAACAAGGAAATTGCTCAAGGTTTAAGGCACAAGAGCGACCGCATTGTTGTGAGAAGGAGCCAACTATCATTGATCTTACGCCGGGGACTCCATATCAGTTACAAGTTACCAATTGTTGCAAAGGTGGGGTCTTAACTTCCATGACACAAGATCCTACAAAAAGTTCTGCTATTTTTCAGATGAATTTCAACAAGGCCTCTAACTTTTCAATCCCAACCGATGATAGCTCATCTGAGAATGTCACAACCAACAATAACAGCATGCCTGAGAAATTCTCACTTGGAATCCCCGGTTACTCTTGCAGCGATCCTTTTCAGGTCCCTCCTAGCAAGGTCACCACTGATGGTCGCAGATGGACACAAGTTCTCGATACATGGAATGTGACCTGTATTTACTCACAGTTCTTAGCATCACCTGCTCCAAAATGCTGTGTCTCCTTGTCTGCATTCTATAACAGTACAATTATTCCTTGCCCTAAATGTAGCTGCAATTGCCAAGGCCTAGCAGGAGCAAATTGTGTCAAttctgGTGAATCTCCTTCACTATTGCAACTTCCACATGATATGAGCACAGAAGATCCAGCACCATTGGTGAGGTGTTCACAGCACATGTGCCCTATTAGGGTTCATTGGCATGTGAAGCAAAGCTACAAAGAGTATTGGAGAGTGAAGATTACAATCACAAATCTGAACTTAGTGAAGAACTACTCTCAGTGGAATCTAGTGCTTTTACACCCTAATTTGCAGAGTATAACCCAAGTTTTCAGCTTCAATTACCAGCCTCTCAGTGTTTATGGAGATACCAATGACACAGGGATGTTCTGGGGGATAAAGTACTACAATGACATGTTGCTGCAATCTGGGGTGAGTGGAAATGTACAAACAGAAATGTTACTGCACAAAGATGCTGGAAATTTCACTTTCAGAGAAGGATGGGCTTTCCCAAGAAAAGTTTCATTCAATGGAGATGAATGTGTTATGCCTTCTCCTGATGATTACCCTAGGCTTCCCAATGCAGCTCATATTGCTGCCAAAGCAAGCTTTTCCTTGGCAAATAAGCATGATTTTGCGAAGCTTCAAACAGAGGCTAAAATATGTGGAAGTCAATTTTCTCACTACTATCATCAATCAAGAATTCCAGACTGGTGGAAATTCAGAAATAGTCAAATAGACAAGGCATTTGATTACATAATAGTCACCAGAACATCAGTGGGGGGTGAAACCGTTACAGCTGTTGAGTTACCACCTCCGGCAAGTCAACTGACCGAAATCGGGCGTTTTCGGCAATGA 1530 0.4301 MSASDWGYDLLYTDLPLSFCTVFGVQSVISTSANFEQVKRVKVSIHNFQLYRHVENPGWKLSWVWKGDEVIWKMWGAEAIEQGNCSRFKAQERPHCCEKEPTIIDLTPGTPYQLQVTNCCKGGVLTSMTQDPTKSSAIFQMNFNKASNFSIPTDDSSSENVTTNNNSMPEKFSLGIPGYSCSDPFQVPPSKVTTDGRRWTQVLDTWNVTCIYSQFLASPAPKCCVSLSAFYNSTIIPCPKCSCNCQGLAGANCVNSGESPSLLQLPHDMSTEDPAPLVRCSQHMCPIRVHWHVKQSYKEYWRVKITITNLNLVKNYSQWNLVLLHPNLQSITQVFSFNYQPLSVYGDTNDTGMFWGIKYYNDMLLQSGVSGNVQTEMLLHKDAGNFTFREGWAFPRKVSFNGDECVMPSPDDYPRLPNAAHIAAKASFSLANKHDFAKLQTEAKICGSQFSHYYHQSRIPDWWKFRNSQIDKAFDYIIVTRTSVGGETVTAVELPPPASQLTEIGRFRQ 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2517 509 Pfam COBRA-like protein 41 213 IPR006918 GO:0010215|GO:0031225
Sto2g2517 509 PANTHER PROTEIN COBRA 36 425 IPR006918 GO:0010215|GO:0031225
Sto2g2517 509 PANTHER COBRA-LIKE PROTEIN 6 36 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2517 Sto-Chr2 38817197 38823327 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g2517 40 417 COBRA Gene Family AT1G09790 58.530 1.28e-154 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2517 - - jre:109002315 599.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g2517 2 38817197 38823327 Sto2g2517 2 38817197 38823327 ECH