Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2516 ATGGCAAATTCAAGGGGCTCATCTGTGTATTCTGGAAAGCACTTTCTGCTTCCTCCTAAAGCTCCGTTCCCTAGTGTTTCCCAACCATATTCTGATTATGTGCCAAATTCTATGAATGGTTTGAATGCCTCTCAGAATCCTAGAGAGGGGCACAACCCCCTTCGAAGGACATCATCTGAGAGCCTTGTCAATGTCATAGAGGAACAGCCTTCGTGGCTTGACGATCTCCTTAATGAGCCAGAGACACCTGTTCGTAGGGTTGGTCATCGGCGTTCTTCAAGTGATTCTTTTGCATACTTAGACACGAGTCACACAACTGATGCCTTTAAAATCAGTTACACAGATCAGGATGACTATAAATATAAGAATTTGGCATCTAATCCTTCTTGGGCATCACAAGACATAGATCATGGCAGAGGTTCACGTCACCCACCCATGTATGCAGAAATGAACTCagcaaaacataaaaataaggcATGGGAATCTTCTGTAAATGCTGTGACACATCCAGGCGGTGCTTCCTCTGGGAGAGACAATGTTGCTTTGCAGAGTTCAGGATCCTCATGTGCTCCACACGAAGCAGAGGGGGTTGCGTCAACTGCAAGTGAAAAGTATAATTCAGTGGAATCTAGTGGTCAGGACGCAAAAGCATCTTCTGGAAGAAAAGATGGTTCTCATGCAAAGTCGTCTGCTTCTGAAACAGATACAAAGCGTGCTAAACAGCAATTTGCTCAACGTTCACGGGTCCGTAAACTTCAATACATAGCTGAGCTGGAACGAAATGTGCAAGCTTTACAAGTAGAAGGGAATGAAGTATCAGCTGAGCTTGATTTTCTTAACCAGCAGAATCTCATTCTGAACATGGAGAATAAAGCCCTCAAGCAACGTTTAGAAAATTTAGCACAGGAGCAGCTTATTAAATATTTGGAGCAGGAAGTCCTAGAAAGAGAGATTGGAAGATTACGCTCGATGTatcagcagcagcagcaacagCCTCAGCAACCTCCACAACACATGACACAAAAGCCACCATCTGCTGGCCATCGCCGCTCAAACAGCAGAGACCTTGAATCCCAGTTTGCAAACCTTTCTTTGAAACCGAAGGAGTCAAATTCAGGTCGTGACCCGGTGACTGGTTCGCTCCGAAGTTAG 1152 0.434 MANSRGSSVYSGKHFLLPPKAPFPSVSQPYSDYVPNSMNGLNASQNPREGHNPLRRTSSESLVNVIEEQPSWLDDLLNEPETPVRRVGHRRSSSDSFAYLDTSHTTDAFKISYTDQDDYKYKNLASNPSWASQDIDHGRGSRHPPMYAEMNSAKHKNKAWESSVNAVTHPGGASSGRDNVALQSSGSSCAPHEAEGVASTASEKYNSVESSGQDAKASSGRKDGSHAKSSASETDTKRAKQQFAQRSRVRKLQYIAELERNVQALQVEGNEVSAELDFLNQQNLILNMENKALKQRLENLAQEQLIKYLEQEVLEREIGRLRSMYQQQQQQPQQPPQHMTQKPPSAGHRRSNSRDLESQFANLSLKPKESNSGRDPVTGSLRS 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2516 383 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN 1 371 - -
Sto2g2516 383 MobiDBLite consensus disorder prediction 200 218 - -
Sto2g2516 383 SMART brlzneu 233 292 IPR004827 GO:0003700|GO:0006355
Sto2g2516 383 Coils Coil 255 303 - -
Sto2g2516 383 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 1 371 IPR044797 -
Sto2g2516 383 MobiDBLite consensus disorder prediction 324 347 - -
Sto2g2516 383 Coils Coil 311 331 - -
Sto2g2516 383 SUPERFAMILY Leucine zipper domain 244 286 IPR046347 GO:0003700|GO:0006355
Sto2g2516 383 MobiDBLite consensus disorder prediction 324 383 - -
Sto2g2516 383 MobiDBLite consensus disorder prediction 356 383 - -
Sto2g2516 383 CDD bZIP_plant_RF2 235 283 IPR044759 GO:0003700|GO:0006355
Sto2g2516 383 MobiDBLite consensus disorder prediction 128 246 - -
Sto2g2516 383 MobiDBLite consensus disorder prediction 1 21 - -
Sto2g2516 383 MobiDBLite consensus disorder prediction 157 190 - -
Sto2g2516 383 MobiDBLite consensus disorder prediction 219 242 - -
Sto2g2516 383 MobiDBLite consensus disorder prediction 34 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2516 Sto-Chr2 38814511 38816984 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g2516 68 307 bZIP Transcription Factor Family AT2G42380 34.241 3.82e-20 87.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g2516 2 38814511 38816984 Sto2g2516 2 38814511 38816984 ECH