Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2512 ATGTTTAATTGTCCTTCCTGCCCTGTTTTTGCAGCAGCTTGTGAATTGCTGGTTGTTATTTCAATGCTTGTATTCTGTGACTACAGTGCAGACATCAAACACGAACATACTTCATATTTCCTGTTTCGTGGGGCCATCATGATGGCCGTGCATACAAACCTTCGGCTTATTGCCTACTCAGAAGAGATTGTAGATGGACAGCCAATTTTTGTTTCTTCGAATTGTCTTCCCATCAAGGCTTGGAACTATGAACCTGCAGGCCATTCCTTCCATTCAGCTGCCCTTAAATTACTTGGTGTTGAGGAAGATAATTCAGATGGTGATGATGAGAAAGTGGTTGATGATAAGGAAAAGATGTATTATGCATCGTCTGATTCTTATAGCAGCAAGAGTAAAAAGAAATCAGGTTCTGGAGACAAGCAACAAGATCACTATGCTTTATTGGGTTTGGGCCATCTAAGGTATCTTGCAACGGAGGATCAAATTCGTAAAAGCTATCGTGAAACTGCCTTGAGGTATCATCCTGACAAACAGGCTGCTCTTCTGCTTGCTGAGGAGACTGAAGCTGCAAAACAAGCAAAGAAGGATGAAATAGAAAGTCATTTTAAGGCAATCCAGGAAGCATATGAGGTGTTGATTGATCCTCTGAAGAGAAGAATTTATGATTCCACTGATGAGTTTGATGATGAAATTCCCACTGACTGTGCCCCACAAGACTTCTTCAAAGTGTTTGGTCCTGCTTTTATGAGGAATGGACGGTGGTCAGTTAATCAACCAATTCCATCTTTGGGAGATGACAATACgccatttaaagaagttgataAATTCTATGATTTCTGGTACACCTTTAAAAGCTGGAGGGAGTTTCCCCATGCTGATGAGTTTGATCTTGAGCAAGCTGAATCTCGAGACCATAGGAGGTGGATGGAAAGGCAGAATGCAAAACTGTCAGAAAAAGCTAGGAAAGAAGAGTATGCACGGATACGTACTCTTGTTGATAATGCTTATAAGAGAGACCCAAGAATACTAAGGAGAAAGGAAGAGGAAAAAGCTGAGAAGCAAAGGAAGAAGGAGGCAAagtttttggcaaaaaaattgCAGGAAGAAGAAGCTGCTAGAATTGCAGAAGAGGAGAGGCGAAggaaggaggagaagagaacGAGCTGCAGAAGCTGCTTTACAACAAAAGAAGAAAGTCTTTGCATGTCACTTGACATTGAACAGCTCAAGAGTTTGTGCCAGAAAATGGAAAGCAAACCAATGTTGGAGCAAGCAGAAATTTTAAGAGATACCCTTGGTCGTAAGAAAGATGTAGATGATAAGAGAGAcaagaaaactgataaacagaATGGTTCCGTAAAGGCTAATGATGTTCCATCGCTAAGCAACTACGTTGAGAAGAAAGAGAAGCCTTGGAATAAGGAAGAGATTGAGCTATTGAGAAAAGGAATGCAAAAATATCCCAAAGGAACCTTACGGAGGTGGGAGGTCATTTCAGAATACATTGGAACAGGAAGATCTGTGGAAGAAATTATGAAGGCAACCAAGACAGTGCTCCTCCAGAAGCCcgattcttccaaatcatttgATGCATTCCTGGAGAAAAGGAAACCTGCACCATCAATTGCATCTCCACTTTCCACCCGAGAAGAATTAACTGGAGAATCAACTCCAGGGAGGCCTGAAAACAACACTACCTCAACTATGAATAACTCAGAAGACTCTCATGGCAAAAGTACTTCAGACAACCTGAAAGCCACAGGTTCAGCTACTGCACATGGAGCTTCCTCTAGTTCAGAGCAAGACACATGGTCTGCCGTACAGGAAAGAGCACTGGTCCAGGCTCTAAAAGCCTTCCCCAAGGAAACTAACCAGAGATGGGAACGCGTTGCAGCTGCTGTTCCCGGAAAGACCGTGAATCAGTGcaagaaaaaatttacaatgtTGAAGGAGAGCTTCAGAAACAAGAAAAGTGCAGTTTAA 1983 0.4019 MFNCPSCPVFAAACELLVVISMLVFCDYSADIKHEHTSYFLFRGAIMMAVHTNLRLIAYSEEIVDGQPIFVSSNCLPIKAWNYEPAGHSFHSAALKLLGVEEDNSDGDDEKVVDDKEKMYYASSDSYSSKSKKKSGSGDKQQDHYALLGLGHLRYLATEDQIRKSYRETALRYHPDKQAALLLAEETEAAKQAKKDEIESHFKAIQEAYEVLIDPLKRRIYDSTDEFDDEIPTDCAPQDFFKVFGPAFMRNGRWSVNQPIPSLGDDNTPFKEVDKFYDFWYTFKSWREFPHADEFDLEQAESRDHRRWMERQNAKLSEKARKEEYARIRTLVDNAYKRDPRILRRKEEEKAEKQRKKEAKFLAKKLQEEEAARIAEEERRRKEEKRTSCRSCFTTKEESLCMSLDIEQLKSLCQKMESKPMLEQAEILRDTLGRKKDVDDKRDKKTDKQNGSVKANDVPSLSNYVEKKEKPWNKEEIELLRKGMQKYPKGTLRRWEVISEYIGTGRSVEEIMKATKTVLLQKPDSSKSFDAFLEKRKPAPSIASPLSTREELTGESTPGRPENNTTSTMNNSEDSHGKSTSDNLKATGSATAHGASSSSEQDTWSAVQERALVQALKAFPKETNQRWERVAAAVPGKTVNQCKKKFTMLKESFRNKKSAV 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2512 660 PANTHER DNAJ DOMAIN, MYB-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED 397 658 - -
Sto2g2512 660 PANTHER DNAJ DOMAIN, MYB-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED 48 386 - -
Sto2g2512 660 SMART dnaj_3 142 217 IPR001623 -
Sto2g2512 660 ProSitePatterns Nt-dnaJ domain signature. 202 221 IPR018253 -
Sto2g2512 660 CDD SANT 603 650 IPR001005 -
Sto2g2512 660 SUPERFAMILY Chaperone J-domain 141 249 IPR036869 -
Sto2g2512 660 ProSiteProfiles SANT domain profile. 599 654 IPR017884 -
Sto2g2512 660 MobiDBLite consensus disorder prediction 546 605 - -
Sto2g2512 660 SUPERFAMILY Homeodomain-like 468 513 IPR009057 -
Sto2g2512 660 ProSiteProfiles dnaJ domain profile. 143 225 IPR001623 -
Sto2g2512 660 SMART sant 468 521 IPR001005 -
Sto2g2512 660 SMART sant 600 652 IPR001005 -
Sto2g2512 660 PRINTS DnaJ domain signature 95 113 IPR001623 -
Sto2g2512 660 PRINTS DnaJ domain signature 166 181 IPR001623 -
Sto2g2512 660 PRINTS DnaJ domain signature 197 217 IPR001623 -
Sto2g2512 660 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 397 658 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Sto2g2512 660 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 48 386 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Sto2g2512 660 Coils Coil 349 387 - -
Sto2g2512 660 Gene3D - 594 660 - -
Sto2g2512 660 SUPERFAMILY Homeodomain-like 602 657 IPR009057 -
Sto2g2512 660 Gene3D DnaJ domain 126 235 IPR036869 -
Sto2g2512 660 Pfam DnaJ domain 143 222 IPR001623 -
Sto2g2512 660 Pfam Myb-like DNA-binding domain 603 649 IPR001005 -
Sto2g2512 660 ProSiteProfiles Myb-like domain profile. 464 519 IPR001005 -
Sto2g2512 660 CDD SANT 471 513 IPR001005 -
Sto2g2512 660 ProSiteProfiles Myb-like domain profile. 596 650 IPR001005 -
Sto2g2512 660 MobiDBLite consensus disorder prediction 434 451 - -
Sto2g2512 660 MobiDBLite consensus disorder prediction 434 461 - -
Sto2g2512 660 CDD DnaJ 143 214 IPR001623 -
Sto2g2512 660 MobiDBLite consensus disorder prediction 532 605 - -
Sto2g2512 660 Gene3D - 465 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2512 Sto-Chr2 38789252 38791528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g2512 144 343 C2H2 Transcription Factor Family AT1G74250 28.870 6.07e-18 85.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sto2g2512 DnaJ 2.8e-17 CL0392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2512 K09522 - gmx:100814414 853.973