Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2507 ATGGATAATCAAGCTGAGAGTTCCCACAACAAGTCTTCCAAGGGAGgggacttgattttcttgcatGGTGACTTAGATTTACGGATAGTAGAAGCAAAATCTCTTCCAAATTTGGATTTATCAAGTGAAGCAAGTCATTCCAAATTGCGAAAACCCTTTGTGGACGAGCATTTTGTTGTCCCGGTGGCTCATCCTGTTCAGAAAATTGTGTTTCTTGTGAAAGATGATGATGTCCTTGGGGCTGAACTCATAGGAGTTGTGGAGATATCTGTTCACAAGGTTTTGTCTGGGAATATTATCAATGATTGGTTTCCAGTTATTGGCCAGTATGGTAGCTGCTTAAAACCTTATCCTGAGTTGCATATTTCAGTGCAGTTTACGCCGGTTCAAGACAAAATCCAGCATCATACCGGTGTTCCTAATACGTATTTCCCTCTTCGGAGAGGAGGGAATGTGACTCTTTATCAAGATGCACATGTACCAGATGCTTCATTACCTGAAATTCCACTTGAGGGTGGAAAAGTGTTTCAGCAGGGTAAATGCTGGGAGGATATTTGCCATGCTATTCTGGAAGCTCACCATCTCATATATGTTATAGGATGGTCTGTTTACCACCGTGTAAGGCTCGTCAGAGAACCGACAAAACCCTTGCCTGCTGGAGGAGAGCTTTCCCTTGGAGAATTGTTGAAATACAAGTCACAAGAAGGGGTTCGCGTTGTTATGCTGCTTTGGGATGACAAAACATCACATGACACCTTTTTTCTGAAAACAGAAGGTGTCATGCAGACCCATGATGAAGAAACAAAGAAATTCTTTAAACACTCCACTGTTCATTGTGTGCTTTCTCCACGTTATGCAAGCAATAAGCTCAGTGTTTTCAAGCAACAAGTTGTGGGAACTCTTTTTACACATCATCAGAAGTGTGTGATTCTTGACACTCAAGGCTCTGGGAATAATAGGAAAATAACTGCTTTTATTGGTGGCTTGGATCTATGTGATGGTAGATACGATACTCCTCAACATCGCCTGTTCGATAATCTTGATACTGTTTTTAAAGATGATTTCCATAATCCTACACTTCCGTCACATTGTACTAGTGACCAAGACAACCATGGCATGACTTACACTGTAAAGCGCGATCGAATATCATGGATTCTCACACCAACAACTAGTGTTGATGGGGATAAGATTGTCCATGTAATTGAAGAAAGTGATCCTGAGACTTGGAATGTTCAGGTATTTCGGTCCATAGATTCAGGATCTGTCAAGGGTTTCCCCAAGGATGTTAAGGAGGCTAAGGATCAGAATCTTCTATGTGGAAAAAACTTGAAAGTTGATAAAAGCATCCATGCTGCTTATGTACATGCAATAAGATCAGCTCAACGCTTCATATATATAGAGAATCAGTATTTTCTTGGATCCTCATATCACTGGCCTCATATAAGCTGCAGTTATCCCAATGTGGCCAGAGGGCGTTCCAACGAGTGCTGCTGTGCAAGAAATCTTGTTCTGGCAGGGACAGACAATGTCTATGATGTACAGGATTATTGCAGACGCCCTTCGAAGGCAGGTCTCTCTGAACGTTATCATCCACAAGattatctcaatttttattgcCTTGGAAAGCGCGAACACGAAATTTCACAAAGTCCATCCGTATCATCTCAGTCAGCTGAACACCGTGCTTTGGTGTATGGTTATCGAATGTCGCTGTGGGCGGAGCATCTCGGGAGCCTAGAAGAAACTCTGGAAGAACCACAGAGCCTGCCATGTATGAGATATGTGAACAACATAGCCAGACATAACTGGGGTGCATATGTATCTGAAGAAACAAGGGCTATGTGGGGACACTTGATGCAGTATCCAGTTCATGTGAGTGCAGAAGGAAGAGTGAGTTCACTTCCAGATTTTGAGTCATTTCCTGATGTTGGTGTGCATTTGACAACGTGGGTTCGACCGGAGAGGGACGGAGCTTCTCTCAAGAGACGCGACTCGTCTGTGAACAATAGAGAGGACGATCTGCTTATTGTGACAACCGTTAGGGAGCTGGAAAATGAAGTGGGTCGCTCTTGTTCCACATGTCCTAGTAAGGGCAAAGTTGTTTTTTCGATTGTGAATACCCCAGCTTATTCGGGTATGGCTGCATTGCCATACTTCGACGAGATTGACCCGTCAACAGTGGAGTCCTTCTCATACTCAGTATTGTTCCTAGTTTACTTTGACTTTGTTCTGCGTGCTTCCTTCATGCCgagAATGGAAAGGCATGCTCTATGTTATTTCCACTTAGCACTTGCTTTTCACTTGGATCATGCTGCATCATTGCCCTATTTTCTGGAAAAGACCACATTCAAAGGCCGAGTGTTTATGACCTATGCAACAAAGGCTATCTACAAACTGCTCCTGTCAGATTATGTGAAAGTGAGCAAGGTTTCTGTTGAAGATATGTTGTTTGATGAACAGGACATTAACCGCTCCATGGATAAAATTGAGGTTATTGATTTTCACCAAACAGTAGAAGTGAATGGTATTCGATTCTGGTGTTATACTGCAGGCCACGTCCTTGGTGCTGCTATGTTTATGGTTGACATTGCTGGTGTTCGATTGCTCTACACTGGAGACTATTCACGAGAGGAAGACCGACACCTTCGTGCTGCTGAAACCCCACAGTTCTCTCCTGATGTGTGCATTATAGAATCCACCTATGGTGTACAGCACCATCAGCCTCGCCACACACGAGAAAAGCGCTTTACTGATGTTATCCACTCTACCGTATCTCAAGGGGGTCGTGTCCTGATTCCAGCATTTGCCCTTGGTCGTGCACAAGAGCTACTCCTGATTCTTgatgaatttgggcaaatcatCCTGAACTCCAGAATATACCCATCTATTATGCTTCTCCACTTGCAAAAAAATGTTTGA 2919 0.4255 MDNQAESSHNKSSKGGDLIFLHGDLDLRIVEAKSLPNLDLSSEASHSKLRKPFVDEHFVVPVAHPVQKIVFLVKDDDVLGAELIGVVEISVHKVLSGNIINDWFPVIGQYGSCLKPYPELHISVQFTPVQDKIQHHTGVPNTYFPLRRGGNVTLYQDAHVPDASLPEIPLEGGKVFQQGKCWEDICHAILEAHHLIYVIGWSVYHRVRLVREPTKPLPAGGELSLGELLKYKSQEGVRVVMLLWDDKTSHDTFFLKTEGVMQTHDEETKKFFKHSTVHCVLSPRYASNKLSVFKQQVVGTLFTHHQKCVILDTQGSGNNRKITAFIGGLDLCDGRYDTPQHRLFDNLDTVFKDDFHNPTLPSHCTSDQDNHGMTYTVKRDRISWILTPTTSVDGDKIVHVIEESDPETWNVQVFRSIDSGSVKGFPKDVKEAKDQNLLCGKNLKVDKSIHAAYVHAIRSAQRFIYIENQYFLGSSYHWPHISCSYPNVARGRSNECCCARNLVLAGTDNVYDVQDYCRRPSKAGLSERYHPQDYLNFYCLGKREHEISQSPSVSSQSAEHRALVYGYRMSLWAEHLGSLEETLEEPQSLPCMRYVNNIARHNWGAYVSEETRAMWGHLMQYPVHVSAEGRVSSLPDFESFPDVGVHLTTWVRPERDGASLKRRDSSVNNREDDLLIVTTVRELENEVGRSCSTCPSKGKVVFSIVNTPAYSGMAALPYFDEIDPSTVESFSYSVLFLVYFDFVLRASFMPRMERHALCYFHLALAFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLSDYVKVSKVSVEDMLFDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVDIAGVRLLYTGDYSREEDRHLRAAETPQFSPDVCIIESTYGVQHHQPRHTREKRFTDVIHSTVSQGGRVLIPAFALGRAQELLLILDEFGQIILNSRIYPSIMLLHLQKNV 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2507 972 Gene3D Endonuclease Chain A 174 357 - -
Sto2g2507 972 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 300 335 IPR001736 GO:0003824
Sto2g2507 972 SUPERFAMILY Metallo-hydrolase/oxidoreductase 761 952 IPR036866 -
Sto2g2507 972 Gene3D - 684 949 IPR036866 -
Sto2g2507 972 Pfam Phospholipase D C terminal 580 644 IPR024632 -
Sto2g2507 972 SUPERFAMILY Phospholipase D/nuclease 447 481 - -
Sto2g2507 972 Gene3D C2 domain 50 139 IPR035892 -
Sto2g2507 972 Pfam Metallo-beta-lactamase superfamily domain 776 887 IPR001279 -
Sto2g2507 972 SUPERFAMILY Phospholipase D/nuclease 135 349 - -
Sto2g2507 972 Pfam C2 domain 51 106 IPR000008 -
Sto2g2507 972 PANTHER PHOSPHOLIPASE D 519 550 - -
Sto2g2507 972 PANTHER PHOSPHOLIPASE D 50 365 - -
Sto2g2507 972 PANTHER PHOSPHOLIPASE D 556 646 - -
Sto2g2507 972 PANTHER PHOSPHOLIPASE D 377 481 - -
Sto2g2507 972 PANTHER PHOSPHOLIPASE D 50 365 IPR015679 -
Sto2g2507 972 PANTHER PHOSPHOLIPASE D 519 550 IPR015679 -
Sto2g2507 972 PANTHER PHOSPHOLIPASE D 377 481 IPR015679 -
Sto2g2507 972 PANTHER PHOSPHOLIPASE D 556 646 IPR015679 -
Sto2g2507 972 Pfam Phospholipase D Active site motif 301 335 IPR001736 GO:0003824
Sto2g2507 972 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 21 131 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2507 Sto-Chr2 38750926 38762241 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g2507 35 555 Phospholipase D Gene Family (Wang group) AT4G35790 48.525 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2507 K01115 - gmx:100810824 739.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g2507 2 38750926 38762241 Sto2g2507 2 38750926 38762241 ECH