Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2502 ATGGCCACGCATTGCACAATGGACCTTCCTCCTGGCGACGATTGCTGCCCTGTGTGCCATGGCGATTTCAACCTCCCATGCCGCACCTCCTGCTCCCACTGGTTCTGCGGAGACTGCATATTACGTGTATGGCTCCATGGAGATGCAATGAAGCAATGCAGATGTCCAATGTGCTGTCGCTATTTTTCCAATCTGGCACCATTTCAAGCAGCATTTGACTGTAGCCAGGATCctgaatcaaataaaattatggAAAATGTAAGAAGGTACAATAGGTTGCACATTGGGGGCATGCAAGGTCTCATCCAGAAACTTTTTGATCTCCCATTTTTCGTTCGGATGGCTCTACAAGATATGATGGATCCTGATAAAACAAGTTCTTACTTGACCAGAGTGCGCCTTTTTGCAATGATAATCGGCGTGATCTACGTGCTCAACCCATTCGACTTCCTCCCGTTAGCTAAAAGAGACATACTAAATTTGTTTGACATCTATGCAACTACATTTGTAACTATCATCCATATTATCGCTGTGTGCCGTGCAAGGCGGTTAATTCAGCGATGA 564 0.445 MATHCTMDLPPGDDCCPVCHGDFNLPCRTSCSHWFCGDCILRVWLHGDAMKQCRCPMCCRYFSNLAPFQAAFDCSQDPESNKIMENVRRYNRLHIGGMQGLIQKLFDLPFFVRMALQDMMDPDKTSSYLTRVRLFAMIIGVIYVLNPFDFLPLAKRDILNLFDIYATTFVTIIHIIAVCRARRLIQR 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2502 187 SUPERFAMILY RING/U-box 7 63 - -
Sto2g2502 187 SMART ring_2 16 58 IPR001841 -
Sto2g2502 187 ProSitePatterns Zinc finger RING-type signature. 31 40 IPR017907 -
Sto2g2502 187 ProSiteProfiles Zinc finger RING-type profile. 16 58 IPR001841 -
Sto2g2502 187 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF170-LIKE ISOFORM X1 8 187 - -
Sto2g2502 187 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 5 95 IPR013083 -
Sto2g2502 187 PANTHER UNCHARACTERIZED 8 187 IPR038896 GO:0061630
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g2502 8 137 C3H Transcription Factor Family AT4G33940 43.077 5.49e-42 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2502 K15707 K24166 csin:114320668 198.364