Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2491 ATGAGTAAAGGGGGGTTTCCAAAGGATGGGGTCATTCAATACTATATTATATGTCAGCAAGTTAATGTCAATTCACTGGAGGAGGTAATCAAGCATTTTATGCACCTGTCAACTGAGAAAGCTGAACAAGCTCGCAGCGAGGCACAAGCATTAGAAGAAGCTCTTGGGGCTGAATCTAACCAATTGTGGGATCCTTTGGCAGCCACACCCATGAGATGCGAACTCAATTCAGAGGCTGAATTTGCCTATGGAGTAGGTACGAGGTGGCTAAAGATTGTGACAGGGATAACAGTAGCTGCGTTGGAGTCACGGATGGAAATGTTTGGGATAATCATAGGAGGTGGCACCATAAAGATTTTCTTCCAAATTGTGTGTGGGAATGGTAAAGCACTCAGTACTATAGAATGTCATTGCCTATTGTATGCTAATATGGATGCTATCTGTAATCAAAGGCAAGCTCCTTCATGTATTCTACCACCTACAAGGCCCCTACAATTTTTGGTTCATCTTGGATCTATTCACGTACTAGGAATTGTTAAAGCAATTAGATGA 552 0.4221 MSKGGFPKDGVIQYYIICQQVNVNSLEEVIKHFMHLSTEKAEQARSEAQALEEALGAESNQLWDPLAATPMRCELNSEAEFAYGVGTRWLKIVTGITVAALESRMEMFGIIIGGGTIKIFFQIVCGNGKALSTIECHCLLYANMDAICNQRQAPSCILPPTRPLQFLVHLGSIHVLGIVKAIR 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2491 183 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 57 IPR027512 GO:0005852
Sto2g2491 183 Coils Coil 34 61 - -
Sto2g2491 183 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT A 1 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2491 Sto-Chr2 38619585 38620751 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g2491 1 55 Eukaryotic Initiation Factors Gene Family AT4G11420 74.545 1.11e-22 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2491 K03254 - ming:122093971 93.5893