Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2475 ATGCAAATCCGACCTCACGACCCTACTCTCTGCGACGCGTGTGTAGCGGCGGGATTTCAGGTTCAGAGGACTCTTACTACGATTGATGGTAACGCTTCTCACTCCACGGACTGCTTTTACTTCGCTATTCTGTATGCTGCTGGGATTGTGAATGCGTATGGTCCTGAGAGTAATGGTGCTGTGACTTGTATTTTTGCGATTCCGGTTTATTCACAAGTGGGTTCTGGAGGGAATAGTCGCCATCTAGCTCTTGTGTTTGGGTTGACTGGAGCTGGTGTTGGGTTGTTAGCCATGTCTGCTTTGTTGGGTGTGTATGTGTGGTATGATAGGaagtggaggaggaagaagatgatgatgaggaggagTTTTGAGTTTGATATTGATCCTGAAGAGCAGAGTTCTCGGCGTAGATTGAGGCCGAATACAGGGTCAATTTGGTTCAAGATTGAGGAGCTCGAGAAGGCTACGAATGGTTTTTCGTCTAAGAATTTCATTGGAAGAGGTGGGTTTGGGATGGTTTACAAGGGAGCTCTTTCGGATGGCTCGGTAGTTGCGGTTAAACGGGTTTTGGAATCGGATTTCCAAGGGATGCGGAGTGAGAGTTATGAGGATAGAGGTCAGAGGTTTCTTGTTTATGATTACATGCCGAATGGTAACCTTGAAGACCATATTTTCCCGGCACCAGCGGTGGGGAATGAAAATAATGCCAAGAGGCCACTGACTTGGCCAGAGAGAAAGAGCATAATCTTGGATGTTGCGAAGGGGTTGGCTTATTTGCATTATGGAGTCAAGCCTGCAATTTTTCACAGGGATATCAAGGCGACGAATATACTACTCGATGTGGATATGAGGGCTAGGGTTGCAGATTTCGGGCTTGCTAAGCAGAGCAGGGAAGGTCAGTCTCATCTCACTACTAGAGTGGCCGGAACTCATGGATATCTAGCCCCAGAGTATGCACTTTATGGTCAGCTTACTGAGAAGAGTGATGTCTATAGCTTTGGTGTGGTTGTTTTGGAGATAATGTGTGGGAGAAAAGCTCTTGACTTGTCTTCGGGAGGATCGCCAAGGGCATTCTTGATCACGGATTGGGCATGGTCGTTGGTGAAATCGGGGAACATAGAAGAGGCTTTGGATGCTTCGCTCGTAAAAGATGGGGATTCTCCAAGTTCAAATCCCAAGAGTATAATGGAAAGGTTTTTGCTGGTGGGAATTCTATGTTCCCATGTAATGGTTGCTTTGAGACCAACAATATCAGATGCGTTGAAGATGTTAGAAGGCGATGTGGAGGTTCCTCAAATCCCCGATCGTCCGATACCTCTAGGGCATCCGTCGTTCTGCAACTATGGTGGTAATACTTTTAGCATATCTCCGGCACTAAGTGGCCCGAAATTGTACTCTGGAGACATGCTCAGGTAA 1416 0.4569 MQIRPHDPTLCDACVAAGFQVQRTLTTIDGNASHSTDCFYFAILYAAGIVNAYGPESNGAVTCIFAIPVYSQVGSGGNSRHLALVFGLTGAGVGLLAMSALLGVYVWYDRKWRRKKMMMRRSFEFDIDPEEQSSRRRLRPNTGSIWFKIEELEKATNGFSSKNFIGRGGFGMVYKGALSDGSVVAVKRVLESDFQGMRSESYEDRGQRFLVYDYMPNGNLEDHIFPAPAVGNENNAKRPLTWPERKSIILDVAKGLAYLHYGVKPAIFHRDIKATNILLDVDMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVVLEIMCGRKALDLSSGGSPRAFLITDWAWSLVKSGNIEEALDASLVKDGDSPSSNPKSIMERFLLVGILCSHVMVALRPTISDALKMLEGDVEVPQIPDRPIPLGHPSFCNYGGNTFSISPALSGPKLYSGDMLR 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2475 471 ProSiteProfiles Protein kinase domain profile. 159 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g2475 471 SUPERFAMILY Protein kinase-like (PK-like) 137 425 IPR011009 -
Sto2g2475 471 Gene3D Phosphorylase Kinase; domain 1 130 205 - -
Sto2g2475 471 ProSitePatterns Serine/Threonine protein kinases active-site signature. 267 279 IPR008271 GO:0004672|GO:0006468
Sto2g2475 471 SMART serkin_6 159 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g2475 471 Pfam Protein kinase domain 200 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g2475 471 Gene3D Transferase(Phosphotransferase) domain 1 215 432 - -
Sto2g2475 471 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 204 466 - -
Sto2g2475 471 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 7 195 - -
Sto2g2475 471 ProSitePatterns Protein kinases ATP-binding region signature. 165 187 IPR017441 GO:0005524
Sto2g2475 471 PANTHER OS01G0253100 PROTEIN 7 195 IPR045271 GO:0004714|GO:0006468
Sto2g2475 471 PANTHER OS01G0253100 PROTEIN 204 466 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2475 Sto-Chr2 38495658 38497155 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g2475 7 471 Receptor kinase-like Gene Family AT1G11050 63.804 0.0 619
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Sto2g2475 Pkinase 1.7e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2475 - - gmx:100806560 726.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g2475 2 38495658 38497155 Sto2g2475 2 38495658 38497155 ECH