Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2436 ATGCCCTCCAAGACGGCCGAGGAGGTGTGGCAGGAGATGGTCGAAGGCGGCGCTGCTGATCAGAGGCGGATGGATGGGTTGGAGGCTATGACTTTGGAGGATTTCTTGGCTAAGGCTGGGGCTGTCAGAGAGGACGATGTCCGAGGGGTCTCTGCTGTAGTACAGCAACAAGGTCCTCCCAGTTACCGTTTGGACGCCGCCGCGGCCACGGCGGCGGTGATCAACGGTGGCGCTCAGTTCCCCATGGCGCCGGTGCAGGGTAAGGAAGGGTCGGCCATGGAGGGTTTTGGGAATGGGATTGAGGGGACTGTTGTTGGAGTAGCGGCTCCTGCGGGAAGGGGGAAGAGGAGGGTTGTCGAGGAACCTGTTGATAAGGCTACGCTTCAGAAGCAGAGAAGGATGATTAAAAACAGAGAGTCTGCGGCCAGGTCAAGAGAACGCAAGcagGCTTACACAGTTGAGTTGGAGACTATGGTTACACAACTCGAGGCAGAGAATGCACAACTATTGAGGGAAATGGCTGAAAAGAAGCGGCAAAGATTCAAGCAGCTCATGGAATGCCTTATTCCAGTAGTGGAGAAGCCGAAACAGCCACGTAAGCTTCGGAGAACGAATTCAACTGAGTGGTGA 630 0.5524 MPSKTAEEVWQEMVEGGAADQRRMDGLEAMTLEDFLAKAGAVREDDVRGVSAVVQQQGPPSYRLDAAAATAAVINGGAQFPMAPVQGKEGSAMEGFGNGIEGTVVGVAAPAGRGKRRVVEEPVDKATLQKQRRMIKNRESAARSRERKQAYTVELETMVTQLEAENAQLLREMAEKKRQRFKQLMECLIPVVEKPKQPRKLRRTNSTEW 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2436 209 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 132 147 IPR004827 GO:0003700|GO:0006355
Sto2g2436 209 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 127 179 IPR004827 GO:0003700|GO:0006355
Sto2g2436 209 Gene3D - 128 185 - -
Sto2g2436 209 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 3 208 IPR043452 GO:0003700|GO:0045893
Sto2g2436 209 SUPERFAMILY Leucine zipper domain 129 180 IPR046347 GO:0003700|GO:0006355
Sto2g2436 209 SMART brlzneu 125 189 IPR004827 GO:0003700|GO:0006355
Sto2g2436 209 Coils Coil 152 184 - -
Sto2g2436 209 Pfam bZIP transcription factor 126 179 IPR004827 GO:0003700|GO:0006355
Sto2g2436 209 CDD bZIP_plant_BZIP46 129 171 - -
Sto2g2436 209 PANTHER OS05G0437700 PROTEIN 3 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2436 Sto-Chr2 38140912 38145573 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g2436 4 209 bZIP Transcription Factor Family AT5G44080 46.667 6.77e-48 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sto2g2436 bZIP_1 5.3e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2436 K14432 - vvi:100250466 222.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g2436 2 38140912 38145573 Sto2g2436 2 38140912 38145573 ECH