Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2407 ATGCCCTCTTCTCTTTGGAGACTCAAAGATATCATGGAGATAGATTTATCCTCCAATGCATTGAGCGGAAGAATTCCACTTGAAATTTCAAGCTTGAGAGCACTTATATTGTTGAATTTGTCAACAAATCAAATTTCAGGAAATATTCCTTCAACTATTGGTGGCTTAAAATCTTTGCTAAATCTATCTTTGGCGCAAAACAAATTGCAAGGGCCAATTCCTGAATCACTTGGAAATATGATAAGTTTGGAGTTCTTGGATCTTTCCCAAAATTTTTTGTCTGGTGTGATTCTGAAGTCCTTAGAGTCACTTGTCCAACTGAAATACATTAATCTTTCTTACAATTTATTGCATGGAGAAATTCCAGATGGTGGACCATTTAAAAGTTCAACTGCTGAATCATTTATGATGAATGAAGATCTTTGTGGGAAGCCTCAACTACAAGTCCATCCATGTAAAAGAGGATACAAGCAGTGGTCAACAAAAAAGACGCTTTTGATCAAATGCTTATTGCCTGTCATGCTGGGTAGTTTTGGTTCAGTATACAAAGGAGTTCTTTCAAGTGGGCAGCTGGTTGCGGTGAAAATATTTCACTTAGACTTGGAGGGAGCATTGAGGAGTTTTGATGCTGAATCATCTGCATTGGAGTATCTTCATCATGGTTCTTCTACACCAACAATTCATTGTGATGTGAAGCCTAGCAATGTTTTGTTGGATGATGATATGGTTGCCCATCTTAGTGATTTTGGCATGGCTAAACTATTAGAGTATGGATCCAAAGGGGTTGTTTCTATTAAAGGAGATGTATACAGTTATGGTATTATGCTGATGAAAGTGTTTACAAGGAAGAAGCCAACAGATGATATGTTTGTCGAAGGTCTAAGTTTGAGAGATTAG 897 0.3724 MPSSLWRLKDIMEIDLSSNALSGRIPLEISSLRALILLNLSTNQISGNIPSTIGGLKSLLNLSLAQNKLQGPIPESLGNMISLEFLDLSQNFLSGVILKSLESLVQLKYINLSYNLLHGEIPDGGPFKSSTAESFMMNEDLCGKPQLQVHPCKRGYKQWSTKKTLLIKCLLPVMLGSFGSVYKGVLSSGQLVAVKIFHLDLEGALRSFDAESSALEYLHHGSSTPTIHCDVKPSNVLLDDDMVAHLSDFGMAKLLEYGSKGVVSIKGDVYSYGIMLMKVFTRKKPTDDMFVEGLSLRD 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2407 298 SUPERFAMILY L domain-like 2 138 - -
Sto2g2407 298 Gene3D Transferase(Phosphotransferase) domain 1 195 298 - -
Sto2g2407 298 SUPERFAMILY Protein kinase-like (PK-like) 176 290 IPR011009 -
Sto2g2407 298 PANTHER RECEPTOR-LIKE PROTEIN 55 176 212 - -
Sto2g2407 298 PANTHER RECEPTOR-LIKE PROTEIN 55 213 297 - -
Sto2g2407 298 PANTHER RECEPTOR-LIKE PROTEIN 55 1 171 - -
Sto2g2407 298 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 176 212 - -
Sto2g2407 298 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 213 297 - -
Sto2g2407 298 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 1 171 - -
Sto2g2407 298 Pfam Leucine Rich Repeat 82 104 IPR001611 GO:0005515
Sto2g2407 298 Pfam Protein kinase domain 213 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g2407 298 Gene3D Ribonuclease Inhibitor 1 159 IPR032675 -
Sto2g2407 298 ProSiteProfiles Protein kinase domain profile. 83 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2407 Sto-Chr2 37898090 37899619 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g2407 212 297 Receptor kinase-like Gene Family AT5G46330 35.714 3.94e-18 82.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Sto2g2407 Pkinase 1.2e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2407 - K13420 csin:114313853 317.775