Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2399 ATGGGAGATTCAGATCATGATCATCATCATAGAAATAATGTGAATAATCTTCCTCCTGGGTTTCGGTTTTACCCTACAGATGAAGAGCTTGTGGTCCATTTCCTTCACAGAAAGGCTTCACTTTTGCCTTGCCATCCTGATGTCATCCCTGATCTTGACCTCTTCCCCTTTGATCCTTGGGACCTTCATGgaaAAGCTTTGGCTGAAGGGAACCAATGGTACTACTATAGCAGAAGGACACAAAATAGAGTGACTAATAATGGGTATTGGAAGCCAATGGGATATGAAGAAGCAATAGTTAAAAGCTCAAGCAATAAGAATGTTGGAGTGAAGAAATATTTTGTGTTCTATATGGGAGAAGCAATCAAAACCAATTGGATAATGCAAGAGTATCGTCTACCAgattctgcttcttcttcttcttcatcttctagcAGATCATCAAAGAGGAAGTCACAGTCAAAAACAGATTTTAGTAAATGGGTGATTTGTCGAGTTTATGAGCACGACGGCGACGATGACAACGATAACGACGGAGGAACAGAACTCTCTTGTTTGGATGAAGTTTTCTTGTCATTGGATGATCTTGATGAAATAAgcttaccaaattag 612 0.366 MGDSDHDHHHRNNVNNLPPGFRFYPTDEELVVHFLHRKASLLPCHPDVIPDLDLFPFDPWDLHGKALAEGNQWYYYSRRTQNRVTNNGYWKPMGYEEAIVKSSSNKNVGVKKYFVFYMGEAIKTNWIMQEYRLPDSASSSSSSSSRSSKRKSQSKTDFSKWVICRVYEHDGDDDNDNDGGTELSCLDEVFLSLDDLDEISLPN 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2399 203 MobiDBLite consensus disorder prediction 135 149 - -
Sto2g2399 203 PANTHER NAC TRANSCRIPTION FACTOR 56 15 200 - -
Sto2g2399 203 Pfam No apical meristem (NAM) protein 18 133 IPR003441 GO:0003677|GO:0006355
Sto2g2399 203 ProSiteProfiles NAC domain profile. 17 169 IPR003441 GO:0003677|GO:0006355
Sto2g2399 203 Gene3D NAC domain 26 172 IPR036093 GO:0003677|GO:0006355
Sto2g2399 203 SUPERFAMILY NAC domain 10 167 IPR036093 GO:0003677|GO:0006355
Sto2g2399 203 MobiDBLite consensus disorder prediction 135 156 - -
Sto2g2399 203 PANTHER NAC DOMAIN-CONTAINING PROTEIN 104 15 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2399 Sto-Chr2 37787657 37788842 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g2399 15 191 NAC Transcription Factor Family AT1G69490 41.579 2.52e-41 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto2g2399 NAM 2e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2399 - - gmx:100170712 279.641