Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2386 ATGGATTCCTTTCTTCTTTGGCCAGTCTTACTGTTTGATCTGTTGCTAAAGGTTTCTGGCAATGCCGAAGGGGTTTGGAGTTCTCCGGACTTGATTACTGTAAATTGTGAGATATCTCATGGGTCTGACCCTTTTGTAGGGCTTGAATTTAATGCCCTGAATGCTCTTAGGAACAACATGGCGGATCCTAATAATGTTCTTCAAAGCTGGGATCCAACCCATGTCAACCCCTGCATGTGGTTTCGTGTTACGTGCAATAGAGATAATAGAGTGACCCGTATTGATCTTGGGGATGAAAACCTTTCGGGTCAACTGGTTCCTCAACTTGGTCAGCTCCTAAATTTACAATACTTGCAACTTCATAGTAATAATATAATTGGAAAAATCCCAGAGGAGCTTGGAAGTTTGACAAAGTTGGTGAGCTTGGATCTTTACTTGAATCGATTAACTGGTCCTATCCCAGACACATTGGGCAACCTTAAAAAACTACGTTATCTGCGTCTCAACAGCAACAATTTGTCAGGAAACATTCCCACATCTTTGACTACTGTTGCTTCTTTGCAAGTCCTttttcaaaataatcctGGATTAAAACAACAAAAGTTTTCTCCTCCTCAATCAGCTTCATCAGGTAAAAGTGCTACAACTACAGTTATTGTTGGAGTAGCAGTTGGTGCTGCTCTGACATTTGCTGGTCCTGCAATTGCATTTGCTTTTTGGCGCATAAGGAAAGAACAGGATGAGTTCTTTGATGTTCCTGATGCCGAGAGTCCTGAAGTTCACCATAGTCGATTTAAACAGTTTTCACTGCATGAGCTGAAAGTTGCAACAAACAATTTTAGTGACCAAAACATTCTGGGTAGAGGTGGTTTTGGGAAGGTTTATAAAGGATGCTTAACTGATGGTTCTCTGGTAGCCGTAAAGAGACTTCAAGAGGAATCTCTCATGGGGAGTAGGGAATTTGAAAATGAAGTGAAAATTCTGGGCATGACCGTGCATCGTAATTTGGTTCGGTTGTGTGGTTTTTGCATGACATCAACGGAACTGATGCTTGTGTATCCTTATATGGTTAATAGAAGCGTGGAATTGAATTTAAGAGTGCATCCAGGATCGCAACCTCTACTTGACTGGCCAAAACGGAAGAGCATTGCACTGGGGGCTGCCAGGGGGCTTGCTTATCTGCATAATCATTGTGACAGAAGGATTATTCATGGTGACTGCAAATGTTCGAATATATTGTTGAATGAGGGATTTGAAGCAGTTATTGCAGACTTTGGTTTAGCAAGAGTTATGGATTTTAAAGATTCTCATGATAACACGTTAGGAATACGTGGTACATATGGGTATATGGCACCCGAGTACTGCCTTCATGGAGTGCTTTCTGTGAAGATTGACGTTTTTGCTTATGGTATTGTGCTTCTTGAACTTATAAGTGGACGGATATATTCTCGCTATTTCATAGACAGAGAGGAATCTCTTCTTGATTGGGCTAAAAGGCTTCTGAAAGAGAAGAAGTTGGAAACGCTGGTGGATCCTCTTTTACAGGGAAATTATGATGCAGAGGAGGCAGAGCAGGTAGTCCAAGTGGCCTTACTATGCACACTACATTCCCCTTCCAATAGACCCAATATGTCTGAAGTGATCACAATGCTTGAAGATGGTGAAGGTTTGGCTGAAAAGTGGGAGAAATTGCAAAATGAGATTTTCCAGCAAGATTTCAACCAACCCGATCACCCCAATTTTAACTGGATAGAAGACTCAGTTTCATACCTCTCAGAAGATGAACTTAGTCTCAGTCCTCGATGA 1806 0.4131 MDSFLLWPVLLFDLLLKVSGNAEGVWSSPDLITVNCEISHGSDPFVGLEFNALNALRNNMADPNNVLQSWDPTHVNPCMWFRVTCNRDNRVTRIDLGDENLSGQLVPQLGQLLNLQYLQLHSNNIIGKIPEELGSLTKLVSLDLYLNRLTGPIPDTLGNLKKLRYLRLNSNNLSGNIPTSLTTVASLQVLFQNNPGLKQQKFSPPQSASSGKSATTTVIVGVAVGAALTFAGPAIAFAFWRIRKEQDEFFDVPDAESPEVHHSRFKQFSLHELKVATNNFSDQNILGRGGFGKVYKGCLTDGSLVAVKRLQEESLMGSREFENEVKILGMTVHRNLVRLCGFCMTSTELMLVYPYMVNRSVELNLRVHPGSQPLLDWPKRKSIALGAARGLAYLHNHCDRRIIHGDCKCSNILLNEGFEAVIADFGLARVMDFKDSHDNTLGIRGTYGYMAPEYCLHGVLSVKIDVFAYGIVLLELISGRIYSRYFIDREESLLDWAKRLLKEKKLETLVDPLLQGNYDAEEAEQVVQVALLCTLHSPSNRPNMSEVITMLEDGEGLAEKWEKLQNEIFQQDFNQPDHPNFNWIEDSVSYLSEDELSLSPR 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2386 601 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1-RELATED 48 190 - -
Sto2g2386 601 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1-RELATED 199 597 - -
Sto2g2386 601 Gene3D Transferase(Phosphotransferase) domain 1 356 570 - -
Sto2g2386 601 SUPERFAMILY Protein kinase-like (PK-like) 257 551 IPR011009 -
Sto2g2386 601 SUPERFAMILY L domain-like 50 198 - -
Sto2g2386 601 ProSiteProfiles Protein kinase domain profile. 280 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g2386 601 Pfam Leucine rich repeat 114 173 IPR001611 GO:0005515
Sto2g2386 601 Gene3D Phosphorylase Kinase; domain 1 249 355 - -
Sto2g2386 601 Pfam Leucine rich repeat N-terminal domain 51 86 IPR013210 -
Sto2g2386 601 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 199 597 - -
Sto2g2386 601 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 48 190 - -
Sto2g2386 601 ProSitePatterns Protein kinases ATP-binding region signature. 286 308 IPR017441 GO:0005524
Sto2g2386 601 Gene3D Ribonuclease Inhibitor 48 216 IPR032675 -
Sto2g2386 601 Pfam Protein tyrosine and serine/threonine kinase 283 551 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2386 Sto-Chr2 37665297 37674021 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g2386 5 601 Receptor kinase-like Gene Family AT4G33430 52.717 0.0 620
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Sto2g2386 PK_Tyr_Ser-Thr 1.1e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2386 K13416 - gmx:100800522 654.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g2386 2 37665297 37674021 Sto2g2386 2 37665297 37674021 ECH