Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2383 ATGGCTTCGTTTCTTCTTTGGGGATTCCTAGTGTTTGATTCTTTGCTAAAGGTTTCTGGCAATTCCGACGTTGATGCCCTAATTGCATTGAAGAACAATATGGCGGATcctaaaaattgttttcaaagcTGGGATTCAACCCACACAAATTCATGCAGCTGGTTTCATGTTACGTGCAATAGTAATAACAGAGTGACCCGTGTTGATATTCAGGACTCTAACCTCTCTGGCCAATTGGTTCCAGAACTTGGTCAGCTCTCAAATTTGCAGTACTTGGAAGTTTATGATAGTAATATAAGTGGAAAAATCCCAGATGAGCTTGGAAATTTGACAAACCTGGTGAGCTTGGATCTTTACTTGAACAGATTAAGTGGTCCTATTCCAGACACATTGGAAACCTTAAACATCTACGCTTTCTCTAGGCGTCTAAACAATAACAGCTTGTCAGGAAACATTCCTATGTCTTTGACAACTGTTGCTTCATTGCAAGTCCTTGATCTCTCCAACAATCAGTTAAGAGGAGATATACCAGCCAATGGTTCATTTTCACTATTTTCATCCTCCAGTTTTCTTAACAATCCTGGATTAGTGCCACTGCCAATTTCTCCAGCACAACCAGCTCGTTCAAGTAAGAGGACTACTTTAGCCATTGCTGGAGGAGTTTTAGCTGCTGTAATTCTGTTATTGGGAGTCCTTGCTATTAAACTTGCTTATTGGCGAAGAAGGAAATTGCAAGCTCATTTTGTGGATGTTCCTGATGAGGATATTGAAATTAACCTTGGTCAGCTTAAACAGTTTTCACTGAATGAGCTGAGATTTGCAACAGATAACTTCAATGAAAGAGCCATTGTGGGTAGAGGTGGATTTGGTAAGGTTTATGAAGGGCGCTTAAGTGATGGTTCTCTAGTGGCCataaaaagactaattaaaCAAGAACATATGCAGTGTGAGGTACACCAATTTCTAACAGAAGTTCAAATGATTAGCATGGCTATGCATCGTAACTTGCTTCGGCTCTGTGGTTTGTGCATCACACCAAGTGAAAGGTTGCTTGTGTATCCTTTCATGGTTAACAGAAGTGTAGCATGGTGTTTAAGAGGTGCATTTCCTCCcttatttgcatatatatatatatatatatatatatatattctagtcgtttaa 1164 0.378 MASFLLWGFLVFDSLLKVSGNSDVDALIALKNNMADPKNCFQSWDSTHTNSCSWFHVTCNSNNRVTRVDIQDSNLSGQLVPELGQLSNLQYLEVYDSNISGKIPDELGNLTNLVSLDLYLNRLSGPIPDTLETLNIYAFSRRLNNNSLSGNIPMSLTTVASLQVLDLSNNQLRGDIPANGSFSLFSSSSFLNNPGLVPLPISPAQPARSSKRTTLAIAGGVLAAVILLLGVLAIKLAYWRRRKLQAHFVDVPDEDIEINLGQLKQFSLNELRFATDNFNERAIVGRGGFGKVYEGRLSDGSLVAIKRLIKQEHMQCEVHQFLTEVQMISMAMHRNLLRLCGLCITPSERLLVYPFMVNRSVAWCLRGAFPPLFAYIYIYIYIYILVV 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2383 387 ProSitePatterns Protein kinases ATP-binding region signature. 284 306 IPR017441 GO:0005524
Sto2g2383 387 SUPERFAMILY Protein kinase-like (PK-like) 256 371 IPR011009 -
Sto2g2383 387 ProSiteProfiles Protein kinase domain profile. 278 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g2383 387 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 4 367 - -
Sto2g2383 387 Gene3D Ribonuclease Inhibitor 20 204 IPR032675 -
Sto2g2383 387 Pfam Protein kinase domain 279 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g2383 387 Pfam Leucine rich repeat N-terminal domain 21 60 IPR013210 -
Sto2g2383 387 PANTHER BNAA08G11770D PROTEIN 4 367 IPR031048 GO:0004675|GO:0005102|GO:0006468
Sto2g2383 387 SUPERFAMILY L domain-like 21 191 - -
Sto2g2383 387 ProSiteProfiles Leucine-rich repeat profile. 161 183 IPR001611 GO:0005515
Sto2g2383 387 Gene3D Phosphorylase Kinase; domain 1 248 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2383 Sto-Chr2 37648788 37655400 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g2383 1 372 Receptor kinase-like Gene Family AT4G33430 54.907 4.50e-136 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Sto2g2383 Pkinase 9.3e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2383 K13416 - gmx:100800522 432.18