Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2377 ATGGGGAATATAAAGGGGGCGATTTCGTCTTTGATGGGCTTGTTTCTTCTTTGGGTAATTTTAGTGTTTGATTTGGTGCTTCAGGTTTCTGGCAATGCGGAAGGTGATGCGCTGAATGCATTGAGGACTAGCATGTCTGATCCTAACAATGTTCTTCAAAGCTGGGATCCTACACTTGTGAATCCCTGCACGTGGTTTCATGTTACGTGCAATAGTGATAATAGTGTGACCCGTGTTGATCTTGGAAATGCAAACCTTTCGGGTCAACTAGTTTCACAGCTTGGTAACCTTCCAAATTTGCAGTACTTGGAACTTTATAGTAATAATATAAGTGGAAAAATCCCAGATGAGCTCGGAAACTTGACAAGCTTGGTTAGCTTGGATCTTTACTTGAACAAATTAAGCGGTCCCATCCCAGACACATTGAGCAATCTGAAGAAACTACGGTTCTTGCGTCTCAATAATAACAGCTTATCAGGAAACATTCCTGTGTCTTTGACTACTGTAGCTTCATTGCAAGTCCTTGATCTCTCAAACAACCGGTTGTCAGGAGATACCCCTGTCAATGGATCATTTTCATTGTTTACTCCTATCAGttttcaaaataatccaCAGTTAAAACAACCAAAGGTTTCTCCAGCTCCTCCATCTCCTCCAGCGTCTCAACCTCGTTCAGGTAATAGTGATACTGCAGCTATCGCTGGAGGAGTTGCAGCTGGTGCTGCTCTGTTGTTTGCAGCCCCTGCAATTGCACTTGCATATTGGCGAAGAAGGAAACCACAGGAATTTTTCTTTGATGTTCCTGctgaggaggatcctgaagttCACCTTGGTCAGCTTAAACGTTTTTCACTGCGTGAGCTGCAAGTTGCAACAGATAACTTTAGTAATAAAAACATTCTAGGTAGAGGTGGTTTTGGGAAGGTTTATAAAGGACGGTTAGCTGATGGTTCGCTAGTAGCAGTAAAAAGACTGAAAGAGGAACGCACCCAGGGTGGGGAGCTGCAATTTCAAACAGAAGTGGAAATGATTAGCTTGGCTGTGCATCGGAATTTGCTTCGGCTGCGTGGTTTTTGCATGACACCAACAGAACGATTACTTGTGTATCCTTTCATGGCTAACGGAAGTGTAGCATCATGTTTACGAGAGCGTCCTGAAACACAATCTCCACTTGACTGGCCAATTCGGAAGCGTATTGCTTTGGGATCTGCTAGGGGACTTGCTTATCTGCATGATCACTGTGATCCAAAGATTATTCATCGTGATGTTAAAGCAGCAAATATATTGTTGGATGAGGAATTTGAAGCAGTTGTTGGAGACTTTGGATTAGCAAAGCTCATGGATTACAAAGATACTCATGTTACCACTGCTGTACGTGGTACGATTGGGCATATAGCACCCGAGTACCTATCGACTGGAAAGTCTTCAGAGAAGACTGATGTTTTTGGATATGGTGTTATGCTTCTTGAACTGATAACTGGACAGAGGGCTTTTGACCTTGCACGTCTTGCCAACGATGATGATGTCATGTTGCTTGATTGGGTGAAAGGACTTCTGAAAGACAAGAGGTTGGAAACACTGGTGGATGCTGATTTACAAGGAAATTACAACGAAGAGGAGGTTGAGCAGCTAATCCAAGTGGCCTTACTATGTACACAAGGCACCCCTTTGGAACGACCCAGAATGTCAGAAGTGGTCAGAATGCTCGAAGGTGATGGTTTGGCCGAGAAGTGGGACCAATGGCAGAAAGATGAAATGTTCCGGCAAGATTTTAATTATGCCCCTCATGCCAATGCTAATTGGATAGTAGACTCAACTTCACATATCCCACCAGACGAACTCTCAGGTCCTCGATGA 1857 0.4292 MGNIKGAISSLMGLFLLWVILVFDLVLQVSGNAEGDALNALRTSMSDPNNVLQSWDPTLVNPCTWFHVTCNSDNSVTRVDLGNANLSGQLVSQLGNLPNLQYLELYSNNISGKIPDELGNLTSLVSLDLYLNKLSGPIPDTLSNLKKLRFLRLNNNSLSGNIPVSLTTVASLQVLDLSNNRLSGDTPVNGSFSLFTPISFQNNPQLKQPKVSPAPPSPPASQPRSGNSDTAAIAGGVAAGAALLFAAPAIALAYWRRRKPQEFFFDVPAEEDPEVHLGQLKRFSLRELQVATDNFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTQGGELQFQTEVEMISLAVHRNLLRLRGFCMTPTERLLVYPFMANGSVASCLRERPETQSPLDWPIRKRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKDKRLETLVDADLQGNYNEEEVEQLIQVALLCTQGTPLERPRMSEVVRMLEGDGLAEKWDQWQKDEMFRQDFNYAPHANANWIVDSTSHIPPDELSGPR 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2377 618 ProSitePatterns Protein kinases ATP-binding region signature. 301 323 IPR017441 GO:0005524
Sto2g2377 618 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 13 618 - -
Sto2g2377 618 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Sto2g2377 618 Gene3D Ribonuclease Inhibitor 31 214 IPR032675 -
Sto2g2377 618 SUPERFAMILY L domain-like 34 200 - -
Sto2g2377 618 Gene3D Phosphorylase Kinase; domain 1 264 371 - -
Sto2g2377 618 Gene3D Transferase(Phosphotransferase) domain 1 372 589 - -
Sto2g2377 618 Pfam Leucine Rich Repeat 171 185 IPR001611 GO:0005515
Sto2g2377 618 Pfam Leucine Rich Repeat 99 121 IPR001611 GO:0005515
Sto2g2377 618 SMART serkin_6 295 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g2377 618 ProSiteProfiles Protein kinase domain profile. 295 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g2377 618 Pfam Protein kinase domain 296 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g2377 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 418 430 IPR008271 GO:0004672|GO:0006468
Sto2g2377 618 MobiDBLite consensus disorder prediction 205 231 - -
Sto2g2377 618 SUPERFAMILY Protein kinase-like (PK-like) 274 570 IPR011009 -
Sto2g2377 618 PANTHER BNAA08G11770D PROTEIN 13 618 IPR031048 GO:0004675|GO:0005102|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2377 Sto-Chr2 37591314 37597661 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g2377 11 618 Receptor kinase-like Gene Family AT4G33430 77.812 0.0 981
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Sto2g2377 Pkinase 1.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2377 K13416 - rcu:8277786 1029.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g2377 2 37591314 37597661 Sto2g2377 2 37591314 37597661 ECH