Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2301 ATGATGGAACCCAATGATGGGAATAGAGAGCAGATTGTGGATGTTCGATCGGTGGTTGAAGCTGTTTCTGCCGAAGATGGAGATGCCCCTGTGTACCAGGTCGAAAGCTTGTGCATGCGTTGCGGTGAAAACGGGACGACAAGATTTTTATTGACACTAATTCCACACTTCAGAAAGATTTTGTTGTCAGCTTTTGAATGCCCTCATTGTGGTGAGAGgAACAACGAAGTACAGTTTGCTGGAGAAATTCAACCACGTGGTTGCTGCTACAATTTGGAGATCCCATTAGGCAATCAGAAGATTCTCGATCGACAAGTAGTAAAATCGGAATCTGCTACTATTAAGATACCAGAATTGGATTTTGAGATTCCTCCGGAGGCTCAGCGTGGTACACTGTCAACGGTTGAAGGGATACTACTACGAGCAGCTGATGAACTTCAGGCCCTTCAAGAGGAGCGCAGAAAAGTTGATCCACAAACGGCTGAAGCAATTGATCAATTCTTGATGAAATTGAGAGCTTGTGCAACTGGCGAGTCTTCATTCACATTTATTCTTGATGATCCTACTGGAAACAGCTTCATTGAAAATCCGTTTGCTCCATCACCTGATCCATCACTCAATATCAAGTTCTATGACCGTGCTCCTGAGCAACAAGCATCATTAGGATATCTTGTTGACTCATCACAAATTGAAGGGAGTCGTGAGGTAGCATCAGCAGGGGTTGCTAATGAAGTAAGGAGAGAACCACATGGGTCAGTGGGGGCAGCAGCTGGTCATCGAGCCATTGCACAGAGTAATAGTGCTGAAATAGCAGAAGCATTATTTAGATATACTGCACCAGAAGAGGTGATGACTTTCCCATCAACTTGTGGTGCTTGTGCCACTAGGTGTGAGACTCGAATGTTTCATACAGAAATTCCATACTTCCAGGAAGTCATCGTTATGGCATCCACCTGTGATGCTTGTGGTTATCGCAACTCTGAGTTAAAACCTGGAGGGGCAATTCCTGAAAGGGGAAAGAAGATAACTCTCTTGGTGAAAAATGTTAAAGATCTAAGCCGTGATGTAATAAAGTCTGATACTGCAAGTGTTAAAGTTCCTGAACTTGAGTTGGAGCTAGCCAGCGGCACCTTGGGAGGAATTGTTACAACCGTTGAAGGTTTAATCACAAAAATTAGTGAAAGCCTTGAGAGGGTGCATGGATTTACTTTTGGAGATAGTCTTGATGAACAAAGAAGGACCAAGTGGCTAGACTTTAAAGCTAGCCTAAATAAGCTTCTTAGCTTGGAACAACCCTGGACTCTAATTCTCGATGATGCCTTAGCCAATTCTTTCATTGCACCTGCAACTGATGACCTAAAAGATGACAACCAATTAACATTTGAGGAATATGTGAGATCATGGGAGCAAAATGAAGAATTGGGTCTGAACGATATCGACACCTCTTCTGCCGACGCCGCCTATAAATCGACAAATGCTGCTAAAACTGAGTGA 1494 0.4344 MMEPNDGNREQIVDVRSVVEAVSAEDGDAPVYQVESLCMRCGENGTTRFLLTLIPHFRKILLSAFECPHCGERNNEVQFAGEIQPRGCCYNLEIPLGNQKILDRQVVKSESATIKIPELDFEIPPEAQRGTLSTVEGILLRAADELQALQEERRKVDPQTAEAIDQFLMKLRACATGESSFTFILDDPTGNSFIENPFAPSPDPSLNIKFYDRAPEQQASLGYLVDSSQIEGSREVASAGVANEVRREPHGSVGAAAGHRAIAQSNSAEIAEALFRYTAPEEVMTFPSTCGACATRCETRMFHTEIPYFQEVIVMASTCDACGYRNSELKPGGAIPERGKKITLLVKNVKDLSRDVIKSDTASVKVPELELELASGTLGGIVTTVEGLITKISESLERVHGFTFGDSLDEQRRTKWLDFKASLNKLLSLEQPWTLILDDALANSFIAPATDDLKDDNQLTFEEYVRSWEQNEELGLNDIDTSSADAAYKSTNAAKTE 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2301 497 Gene3D ZPR1, A/B domain 334 476 IPR042451 -
Sto2g2301 497 Gene3D ZPR1, A/B domain 82 223 IPR042451 -
Sto2g2301 497 PANTHER ZINC FINGER PROTEIN ZPR1-RELATED 10 490 - -
Sto2g2301 497 Coils Coil 132 152 - -
Sto2g2301 497 Pfam ZPR1 zinc-finger domain 288 446 IPR004457 GO:0008270
Sto2g2301 497 Pfam ZPR1 zinc-finger domain 36 195 IPR004457 GO:0008270
Sto2g2301 497 SMART zpr1 36 196 IPR004457 GO:0008270
Sto2g2301 497 SMART zpr1 288 448 IPR004457 GO:0008270
Sto2g2301 497 Gene3D ZPR1, zinc finger domain 27 81 IPR042452 -
Sto2g2301 497 Gene3D ZPR1, zinc finger domain 278 333 IPR042452 -
Sto2g2301 497 TIGRFAM ZPR1_znf: ZPR1 zinc finger domain 289 480 IPR004457 GO:0008270
Sto2g2301 497 TIGRFAM ZPR1_znf: ZPR1 zinc finger domain 38 218 IPR004457 GO:0008270
Sto2g2301 497 PANTHER ZINC FINGER PROTEIN ZPR1 10 490 IPR040141 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g2301 6 495 C2H2 Transcription Factor Family AT5G22480 77.189 0.0 789
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2301 K06874 - gmx:100814878 849.351