Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2293 TTGATTTGTGTAGTTCCCAAGCAGAGAAGGCTGCAAATTTCAGAAGAGAAAGGTTCAACTTCATCCTGTTTGCAGGAAGATAAGGATAGAATTTTACCAGTTCACAGACCTGACAAGGGTGGTACAATAGCCATTCAAACTAGTAGGCTCCGCGTCAATCATTTTCTGGTCAAGTTCAGACCAGAGAGTATAGTCATGCACTATAATGTTGATGTGAAACCTAAGTTACCTGGAAAACATGGTCGACCTCAGAAAATATCGAAGTTTGACCTCTCGTTGATCAGGGAAAAATTGTTTTCCATTGATCCTGCGAGACTTCCATTGGGGAAAACTGCATATGATGGTGAGAAGAGTATTTTCAGTGCAGTTCCATTACCAGAAGAAACCTTTATAGTGGATGTCTCTAGAGGAGAGGATGAAAAGAGCATTTCATATGCAGTTACCTTGACCCTTGTTAACAAACTTGAGTTTCGCAAGCTAAAGCAATACCTTTGTAAGGAGGTTTTCTCAATTCCTAGGGATATTTTACAAGGGATGGATTTGGTGGTGAAAGAAAATCCATCCAGGCGTACAGTTTCTTTGGGACGACACTTCTATCCCACAAATCCTCCTTTGTTGCATAAGGATCTTCATCATGGTGTAATTGCGATAGCGGGATTTCAACATAGTTTAAAGCCTACATCTCAGGGTCTATCATTATGCCTTGACTATTCTGTTTTGTCTTTTCGGAAGCGAATGTCTGTCTTCGATTTTTTACGGGAGCGTATTAAGGGATTTAATTTGAAAGAATTTGAGCATTTTAGGTATGATGTTGAGAATGAACTGATCGGGTTGAAAGTTCATGTGACACACAGAAGATCCAAACAAAAATACACCATCACAAAAATAACGAAGAGGAACACAGGGGATCTCTCTTTTCCTAAAGTGGACCCAGAGGGACATAACAGCGTGCAGAATGTTAGACTTGTTGACTATTTTAAGGAAAAATGGGACACGGACATAATGTACAAAGACATTCCTTGCTTAGATTTTGGGAAAGGCAACAACATACACTATGTGCCTATGGAATTCTGTGTTTTAGTTGATGGTCAAAGATTTCCCAAGGAGAATTTGGACTGGGATGCTACCAATACATTAAAAACGATGTCATTGGCTAAACCAAAGGAGAGGCAGCGTGCAATACAGAAGATGGTGGAGTCAAGTGATGGACCTTGTGGTGGTGGTATTATTCAAAATTTCGGAATGGAAGTCAATAGATCCATGACAGCTGTAGAAGGGCGCATAATTGGACCACCAAAATTGAAGTTAGGTGATCCAAGTGGCAAGATTATGACTGTAGCACCGGATCGAGAGAATTGTCAGTGGAATTTAATTGGAAAATCAATGGTTGAAGGTAAGCCAGTTGAGCGTTGGGGCATTCTTGATTTCACCGCAAGTGGGCCATTTAAGGGTAGATTAAGAACGGGTGACTTCATTTATAATCTTATTAATAAGTACAAAAAGTTTGGGATTTACATGAATGAGCCTGTTTTGGTCGAAGCTTCTTCAATGAGACAACTTTCGAGTTATGACTCACTGTGTCATTTACTTGAAAATGTAAATGACAAGGCTTACAGAATTTGTCGTGGTCGGCTGCAATTTCTTCTCTGTGTGATGGATCGCAGAGATAACGGGTACAAGACTCTCAAGTGGGTTTCTGAGACCAAAGTTGGTATAGTGACACAATGCTGCTTGTCTGGATTAGCCAACAATGGGAAAGACCAATATCTCACCAATCTTGCTCTCAAGATCAATGCGAAACTCGGAGGCAGTAATGTGGAACTCAATAATAGCCTTCCTTATTTTAATGGGAACGATAACGTTATGTTCATAGGGGCTGATGTCAATCATCCTGCTGCACGGGACACCAATAGTCCCTCAATTGTTGCTGTGGTTGCAACTGTTAACTGGCCCGCTGCAAACCGGTATGCTGCTCGTGTTTGCCCGCAATTCCATCGGAAAGAACAAATATTGAACTTTGGAGAAATCTGTCTTGAGCTTTTAGGATGTTATGAAAGCTTGAATGGAGTCAAGCCGgggaaaattgttatttttcgTGATGGGGTGAGCGAGGGTCAATTCGACATGGTTCTTAATGAAGAGCTACAAGACCTGAAAAGAACTTTCCGGCGATCAAACTACATCCCAACCATCTCACTTATTGTGGCACAAAAGCGGCATCAGACTCGATTCTTCCCCGAAGGGCCTGCCAGCGGAAATGTTTCTCCAGGAACAGTTGTGGATACGATAGTCATACACCCTTTTGAGTTCGACTTTTACCTTTGTAGTCACCATGGAAGTATGGGTACCAGCAAGCCCACTCATTATCATGTCTTGTGGGATGAACACAGGTTCACATCTGATGAACTTCAGAAACTCATTTATGATATGTGCTTTACCTTTGCTAGGTGCACTAAACCTGTCTCTCTAGTCCCTCCTGTGTACTATGCTGATCTTGCAGCTTATAGGGGAAGGCTTTACCACGAAGCTAGGATCGCTGTTCAGTCTCCAGATTCAGTCGTATCAACCTCGTCGTCTGTGATTTCTTCATCACTTTCATCCGCAGCTTCAGTTGAACAAGGGAACTACAGGTTGCATGCCGACTTGGAAAATGTGATGTTCTTCGTGTAA 2670 0.4161 LICVVPKQRRLQISEEKGSTSSCLQEDKDRILPVHRPDKGGTIAIQTSRLRVNHFLVKFRPESIVMHYNVDVKPKLPGKHGRPQKISKFDLSLIREKLFSIDPARLPLGKTAYDGEKSIFSAVPLPEETFIVDVSRGEDEKSISYAVTLTLVNKLEFRKLKQYLCKEVFSIPRDILQGMDLVVKENPSRRTVSLGRHFYPTNPPLLHKDLHHGVIAIAGFQHSLKPTSQGLSLCLDYSVLSFRKRMSVFDFLRERIKGFNLKEFEHFRYDVENELIGLKVHVTHRRSKQKYTITKITKRNTGDLSFPKVDPEGHNSVQNVRLVDYFKEKWDTDIMYKDIPCLDFGKGNNIHYVPMEFCVLVDGQRFPKENLDWDATNTLKTMSLAKPKERQRAIQKMVESSDGPCGGGIIQNFGMEVNRSMTAVEGRIIGPPKLKLGDPSGKIMTVAPDRENCQWNLIGKSMVEGKPVERWGILDFTASGPFKGRLRTGDFIYNLINKYKKFGIYMNEPVLVEASSMRQLSSYDSLCHLLENVNDKAYRICRGRLQFLLCVMDRRDNGYKTLKWVSETKVGIVTQCCLSGLANNGKDQYLTNLALKINAKLGGSNVELNNSLPYFNGNDNVMFIGADVNHPAARDTNSPSIVAVVATVNWPAANRYAARVCPQFHRKEQILNFGEICLELLGCYESLNGVKPGKIVIFRDGVSEGQFDMVLNEELQDLKRTFRRSNYIPTISLIVAQKRHQTRFFPEGPASGNVSPGTVVDTIVIHPFEFDFYLCSHHGSMGTSKPTHYHVLWDEHRFTSDELQKLIYDMCFTFARCTKPVSLVPPVYYADLAAYRGRLYHEARIAVQSPDSVVSTSSSVISSSLSSAASVEQGNYRLHADLENVMFFV 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2293 889 Pfam Argonaute linker 1 domain 194 244 IPR014811 -
Sto2g2293 889 SMART Piwi_a_2 547 841 IPR003165 GO:0003676
Sto2g2293 889 CDD PAZ_argonaute_like 246 361 - -
Sto2g2293 889 Pfam PAZ domain 265 372 IPR003100 GO:0005515
Sto2g2293 889 PANTHER TRANSLATION INITIATION FACTOR 2C, PUTATIVE-RELATED 4 888 - -
Sto2g2293 889 Pfam N-terminal domain of argonaute 49 182 IPR032474 -
Sto2g2293 889 ProSiteProfiles Piwi domain profile. 547 842 IPR003165 GO:0003676
Sto2g2293 889 Gene3D paz domain 241 366 - -
Sto2g2293 889 SMART PAZ_2_a_3 250 399 IPR003100 GO:0005515
Sto2g2293 889 ProSiteProfiles PAZ domain profile. 271 362 IPR003100 GO:0005515
Sto2g2293 889 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 4 888 - -
Sto2g2293 889 SUPERFAMILY Ribonuclease H-like 539 842 IPR012337 -
Sto2g2293 889 Gene3D - 616 889 IPR036397 GO:0003676
Sto2g2293 889 Gene3D - 428 610 - -
Sto2g2293 889 SUPERFAMILY PAZ domain 242 400 IPR036085 GO:0005515
Sto2g2293 889 CDD Piwi_ago-like 409 840 IPR045246 -
Sto2g2293 889 SMART DUF1785_2 192 245 IPR014811 -
Sto2g2293 889 Pfam Piwi domain 548 838 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2293 Sto-Chr2 36736859 36740510 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g2293 12 888 Eukaryotic Initiation Factors Gene Family AT1G48410 34.713 5.88e-146 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2293 K11593 - gmx:100783571 1192.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g2293 2 36736859 36740510 Sto2g2293 2 36736859 36740510 ECH