Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2292 ATGGCTAATTCAGGTGAACCATCATCATCTTTGAGCTTTACTTCATCTTCCCATTTATCAAATGGTTCTGCTAACCACAACATGTGCTCTTCTCACGGTTCTGATCCTGGACCCAACCTTGAAGTGATCAGTTTGAGTAAGCTTAGCTCTTGTTTGGAGCAGCTTTTGGTTGATTCTGATGTTGATTTTAGTGATGCCGAAATCCTTGTTGAAGGAACAGCCGTTGGTGTTCATAGATGTATTCTAGCCTCTAGGAGCAAGTTTTTCCATGAGTTATTCAAGAGAGATAAAGGATCTTCCtcagagaaagaaggaaaattGAAGTATTGCATGAGTGATTTGTTGCCATATGGCAAGGTTGGATATGAAGCTTTCCAGATATTCTTGGGCTATTTGTATACTGGAAAACTCAAGCCCTCTCCAATGGAAGTGTCAACGTGTGTTGACAATTCATGTGTTCATGATGCTTGTAGACCAGCAATtaattttgctgtggagttgtTGTATGCCTCTTCCATTTTTCAAATACCAGAATTGGTATCGCTTTTCCAGCGACGCCTTCTTAATTTTGTAGGGAAGGCTCTTGTAGAAGATGTCATCCCTATACTCACTGTAGCTTTCCATTGTCAATTGAGTCAACTTGTCGCTCAATGTGTTGATAGGGTGGCACGATCGGACCTTGATAACATCTCAATTGAGAAGGAGCTTCCCTTAGAACTTGCAGGAAAAGTCAAACCGATCCGCCGCAACTGCCTGCAAGatgttgaaaatgaaaataatgcatCTGTAGTTGATGACCCAGTGCATCAGAAGAGAATCACTAGAATACATAAGGCACTAGACTCAGATGATGTCGAGCTCGTTAAACTACTTTTAACTGAGTCAGATGTAACATTGGATGAAGCCAATGCTCTTCATTATGCTGTTGCATACTGCGATCCTAAGGTTGTTTCTGAGGTTCTTAGTTTGGGACTGGCAGATGTCAACCTCCGGAATTCTCGGGGCTACACCGTTCTTCACATTGCTGCCATGCGTAAGGAGCCTTCGATTATTGTATCTCTTCTTACAAAAGGGGCCTGTGCATCAGACTTGACTTTTGATGGTCAGAGTGCTGTTAGTATCTGCAGGAGGTTGACTAGACCAAAGGATTATCATGCAAAAACGGAACAGGGGAAGGAAACAAACAAAGATCGGATATGCATCGATGTTTTGGAAAGAGAAATGCGGAGAAATCCAATGGCTGGGGATCCCTCTATGTCTTCACATACAATGGCTGATGATCTGCACATGAAGCTGCTATACCTTGAGAACAGAGTGGCATTTGCGAGACTGTTCTTCCCTTCGGAAGCCAAGCTAGCTATGGACATTGCGCATGCTCAGACAACGTCTGAGTTTGCAGGTCTTACTGCATCAAAAGGTTCAAATGGTAATTTGAGGGAGGTTGATCTAAATGAGACTCCTCTGGTGCAAAACAAAAGACTTCTTTCTAGGATGGAGGCCCTGATGAAAACAGTTGAGATGGGCCGGCGCTACTTCCCTCACTGCTCGGAAGTGCTGGACAAGTTCATGGAGGATGACTTGCCTGACTTGTTTTATCTTGAGAAGGGCACCCATGAAGAACAAAGAATCAAGAGGGCGCGATTCATGGAGCTCAAAGACGATGTTCAAAAGGCTTTCAACAAGGACAAGGCCGAGTTTACACGCACCGGGATTGCGTCTTCATCATCGTCATCAACTTTGAGAGAGTCTGTACATAACAAGGTTAGAAAACTGTGA 1776 0.424 MANSGEPSSSLSFTSSSHLSNGSANHNMCSSHGSDPGPNLEVISLSKLSSCLEQLLVDSDVDFSDAEILVEGTAVGVHRCILASRSKFFHELFKRDKGSSSEKEGKLKYCMSDLLPYGKVGYEAFQIFLGYLYTGKLKPSPMEVSTCVDNSCVHDACRPAINFAVELLYASSIFQIPELVSLFQRRLLNFVGKALVEDVIPILTVAFHCQLSQLVAQCVDRVARSDLDNISIEKELPLELAGKVKPIRRNCLQDVENENNASVVDDPVHQKRITRIHKALDSDDVELVKLLLTESDVTLDEANALHYAVAYCDPKVVSEVLSLGLADVNLRNSRGYTVLHIAAMRKEPSIIVSLLTKGACASDLTFDGQSAVSICRRLTRPKDYHAKTEQGKETNKDRICIDVLEREMRRNPMAGDPSMSSHTMADDLHMKLLYLENRVAFARLFFPSEAKLAMDIAHAQTTSEFAGLTASKGSNGNLREVDLNETPLVQNKRLLSRMEALMKTVEMGRRYFPHCSEVLDKFMEDDLPDLFYLEKGTHEEQRIKRARFMELKDDVQKAFNKDKAEFTRTGIASSSSSSTLRESVHNKVRKL 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2292 591 Pfam BTB/POZ domain 62 184 IPR000210 GO:0005515
Sto2g2292 591 PANTHER REGULATORY PROTEIN NPR3 10 579 - -
Sto2g2292 591 ProSiteProfiles Ankyrin repeat profile. 334 359 IPR002110 GO:0005515
Sto2g2292 591 Pfam Ankyrin repeats (3 copies) 277 359 IPR002110 GO:0005515
Sto2g2292 591 ProSiteProfiles Ankyrin repeat region circular profile. 334 359 - -
Sto2g2292 591 SUPERFAMILY Ankyrin repeat 270 377 IPR036770 -
Sto2g2292 591 SMART ANK_2a 271 299 IPR002110 GO:0005515
Sto2g2292 591 SMART ANK_2a 300 330 IPR002110 GO:0005515
Sto2g2292 591 SMART ANK_2a 334 366 IPR002110 GO:0005515
Sto2g2292 591 Pfam NPR1/NIM1 like defence protein C terminal 376 578 IPR021094 -
Sto2g2292 591 ProSiteProfiles BTB domain profile. 64 141 IPR000210 GO:0005515
Sto2g2292 591 SMART BTB_4 64 191 IPR000210 GO:0005515
Sto2g2292 591 Gene3D Potassium Channel Kv1.1; Chain A 39 223 IPR011333 -
Sto2g2292 591 SUPERFAMILY POZ domain 49 189 IPR011333 -
Sto2g2292 591 MobiDBLite consensus disorder prediction 570 591 - -
Sto2g2292 591 PANTHER REGULATORY PROTEIN NPR3 10 579 IPR044292 GO:0009862|GO:2000022|GO:2000031
Sto2g2292 591 CDD BTB_POZ_NPR_plant 47 191 - -
Sto2g2292 591 Gene3D - 267 408 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2292 Sto-Chr2 36715323 36720705 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Sto2g2292 NPR1_like_C 1.8e-96 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2292 K14508 - gmx:100217338 974.156
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g2292 2 36715323 36720705 Sto2g2292 2 36715323 36720705 ECH