Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2261 CTGAATCCTCCAGTGGAGATCGAGAAGAGGAAACACAAGCTCAAGCGTCTTGTTCAGTCTCCTAATTCGTTCTTCATGGATGTTAAATGTCAAGGATGCTTCAATATAACCACTGTATTTAGCCACTCGCAAACAGTTGTTGTTTGTGGGAATTGCCAGACTGTATTGTGCCAGCCAACTGGTGGCCGTGCTCGGTTAACAGAGGGATGCTCTTTCAGGAAGAAGGGAGATTAG 234 0.4573 LNPPVEIEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFRKKGD 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2261 77 PANTHER 40S RIBOSOMAL PROTEIN S27-RELATED 1 76 - -
Sto2g2261 77 SUPERFAMILY Zn-binding ribosomal proteins 21 75 IPR011332 GO:0006412
Sto2g2261 77 Pfam Ribosomal protein S27 21 75 IPR000592 GO:0003735|GO:0005840|GO:0006412
Sto2g2261 77 Gene3D - 1 76 IPR023407 -
Sto2g2261 77 Hamap 30S ribosomal protein S27e [rps27e]. 15 75 IPR000592 GO:0003735|GO:0005840|GO:0006412
Sto2g2261 77 ProSitePatterns Ribosomal protein S27e signature. 29 61 IPR000592 GO:0003735|GO:0005840|GO:0006412
Sto2g2261 77 PANTHER 40S RIBOSOMAL PROTEIN S27 1 76 IPR000592 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2261 Sto-Chr2 36530638 36531175 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g2261 1 77 Cytoplasmic Ribosomal Protein Gene Family AT3G61110 92.208 1.13e-51 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2261 K02978 - sspl:121779304 165.236