Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2232 ATGGCCGACGAGCGTACCTCGACCCCTGCGATTTCCAAAGAACGCGAAGGAACATACCGACTGCACAACTCCAATCACCCTCACATGGCGTTGGTGAATACAACCTTGGACGGCAAAAATTTCTTTGCATGGAGTATAGCGATGAGGACCGCATTGGAAGCAAAAGACAAAGTTGGCTTCATCGACGGTAGCGTACCTGAACCAGAAGAGGCATCTGAACGAAGAAAATGGAAGATGGTGGATTCCATGGTTAAGACATGGATCACAAACTCGCTTTCAAAGGAGATCGCTGATACGTTCGTTTATTGCGTTTCTGCTAAGGCTCTGTGGGATGTCTTAGCGCAGAGATATGGGACTCGAAACGCTCCTCACGTTTACCAGATTCAAAGGCACACAAGCTCAGTTCGACAGGGAGCAGATTCGGTAACGCTTTATTATAATAAGCTCCATCGTTGCTGGGACGAGATGGACCGTGTAATGCCAACTCCCGCCTGTACCTGCGCAAAATATGAAGCACAAAGGGAAATAGGATTAACCTACTCTAGTGCTGTCGAGACACCAAGTCTTATGATGGCAAAAGCACAGCAAGGCAAAAACGATGGAAATTACAAGAAAAGAGATCCTTCAAAGAAGGATAAGGTCTGTGAACACTGCAATGGCAATGGACACACAAAGGATACATGTTTTAAGATCCATGGCTACCCCGAATGGTGGAAAGAATTCAAGGAAAAGAAGGCTGCAGCAAATGGAAAGAAAGCTGTGAGCAATATGGCAACTGAAAAGATCATTCAAGAGACTCCAATCACTCAAGAATTTGATGGAAAAGGGGATCTAACTAGTGTTGTGAATTATCTCCTTAAAGAAGTTCAGCGGCTGGGAAAAGGTAAACTAAGTACCAGCAAAGATGAACAGGTTCACTTCGCTTATCTTCATGAATTTGTAGGTAATCTTAAAGATTATAAGAATCTTAAATCTTTAAACTCTTGTTGGATCATTGACACAGGGGCCACATCCCATATGTGTTGTAACAAGATGCTAATGCATGATTGTAACCCCTTAGTAACACCCAAAACCGTGCATCTACCTGATAAGACCACAAAACTTATTCATAGCATAGGGAAAGTAACACTACAAAATAATCTTGTTTTGAATAATGTGTTCTTCATGCCAACCTTTGGATACAACTTATTATCTGTGCATAAACTGATTAAAGACACTAATGTGTATGTTACATTTTTCCCATCACATTGCTTGATTCAGGACCAGAGGAGTAGTCGCATCCTGGCTAAAGGAGCAGCTATTGGAAGCCTCTATTACTTAGATGAATCTTGTCTTTCTTTTCCTACTAGCTTTGTCAAGACTGATACGATTTGTTGTAATAATGCAAAAGCATTAAACATGAAACATAATGACTCTTTTGATGTATGGCATATGAGACTAGGACATCCCTCTATTAAAGTGATGCAACAAATAAATGATATTGCTTTCATTCCTGATGCTACTGCTTGTGATATTTGCCATGCTGCTAAACAACCTAGGCTAGCTTTTGGACATAGCAATAGATATGTTGCAGGACAAAAAGCCTATAAACTCTATGATTTAGATAATAAAAGGACCCTCATTTTTAGGGATGTTGTCTTTTATGAAACACAATTTCCTTTTCTTAACACACCCACTGAAAGCAACCTCCCACTACCCTTGATACCCGTGACAGCAAATACAATGGAAACCGGTTTTAATGATCCTTTTTCTCACCCCAATGCTGCCACACCGACAGATACACCGACAGCATCCTTAGACCAAACCAGCAATAGCCCTGCACATTTAGCACCTACACCTATGACACCTAATCTAGGTACACGTGATGCAGAACCCATACCAACCTTACCTGTCAATCCAATGGATAATGACCCTGTACCCTTAAGGACTAGTACATGGCTCCAAGATTATGTATGTTTCTCTAAACACAATGAGAacgaaagagaaagagaaggaatgAAGGAATCCTCATCATCAGGTTCAGGAGGGAAGAGAAGTGAGAGTGAGAAAGAGAAGACGAAGATGAGAGAGAGGCATAGAAGAGCCATCACTACCAATATCTTCCATGGCTTGAGAAAGCATGGAGGATATCGTCTCTCTCCTCGCGCAGACATCAATGAGGTGCTGCGTGAACTCGCTAAGGAGGCTGGCTGGGTCGTTGAGCCTGATGGAACCACCTACCGATCCTCCTCCAAGAGCAGAACAGGGGATTCGCCTTGCTTGCTAGTTGTTGCTGCTGGGTGTACCCATTTTGGTGATTCTTACCTTGTGGGTATACCCATTTGCTGTACTCTGTGTGGGGCTCCTCAGACCTCGTCCGCCGCTGCCGCCGGCGACGGAGGAGCAGACTGCTCAACGACGGCTGCAGGAGATCCTCTGTCAAACACCAATGTTGGGTCTTGTTCGTTGCTCTGTTTTCGCACCGTCTCTGTTCCGGTGTACACATACCAAGAGCTCGCCGGAGATACCCACTCCGGCGACGGCGGCCGGAGCGGCATTCAAGGTGGCTTCACGACGATGACGTGTCAGCaagaaggggaagaagaagaagtgcaTTTAGAAGGTGTGAGCATGTCGAATCAGAAAACAATGATGGGAATGGGATCTTCTTCTTCTGTGCATCGCCATTGA 2670 0.4348 MADERTSTPAISKEREGTYRLHNSNHPHMALVNTTLDGKNFFAWSIAMRTALEAKDKVGFIDGSVPEPEEASERRKWKMVDSMVKTWITNSLSKEIADTFVYCVSAKALWDVLAQRYGTRNAPHVYQIQRHTSSVRQGADSVTLYYNKLHRCWDEMDRVMPTPACTCAKYEAQREIGLTYSSAVETPSLMMAKAQQGKNDGNYKKRDPSKKDKVCEHCNGNGHTKDTCFKIHGYPEWWKEFKEKKAAANGKKAVSNMATEKIIQETPITQEFDGKGDLTSVVNYLLKEVQRLGKGKLSTSKDEQVHFAYLHEFVGNLKDYKNLKSLNSCWIIDTGATSHMCCNKMLMHDCNPLVTPKTVHLPDKTTKLIHSIGKVTLQNNLVLNNVFFMPTFGYNLLSVHKLIKDTNVYVTFFPSHCLIQDQRSSRILAKGAAIGSLYYLDESCLSFPTSFVKTDTICCNNAKALNMKHNDSFDVWHMRLGHPSIKVMQQINDIAFIPDATACDICHAAKQPRLAFGHSNRYVAGQKAYKLYDLDNKRTLIFRDVVFYETQFPFLNTPTESNLPLPLIPVTANTMETGFNDPFSHPNAATPTDTPTASLDQTSNSPAHLAPTPMTPNLGTRDAEPIPTLPVNPMDNDPVPLRTSTWLQDYVCFSKHNENEREREGMKESSSSGSGGKRSESEKEKTKMRERHRRAITTNIFHGLRKHGGYRLSPRADINEVLRELAKEAGWVVEPDGTTYRSSSKSRTGDSPCLLVVAAGCTHFGDSYLVGIPICCTLCGAPQTSSAAAAGDGGADCSTTAAGDPLSNTNVGSCSLLCFRTVSVPVYTYQELAGDTHSGDGGRSGIQGGFTTMTCQQEGEEEEVHLEGVSMSNQKTMMGMGSSSSVHRH 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2232 889 MobiDBLite consensus disorder prediction 657 690 - -
Sto2g2232 889 Pfam GAG-pre-integrase domain 437 511 IPR025724 -
Sto2g2232 889 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 668 803 IPR033264 GO:0003700|GO:0006351|GO:0009742
Sto2g2232 889 Pfam Retrotransposon gag protein 84 162 IPR005162 -
Sto2g2232 889 MobiDBLite consensus disorder prediction 578 626 - -
Sto2g2232 889 Pfam gag-polypeptide of LTR copia-type 22 69 IPR029472 -
Sto2g2232 889 MobiDBLite consensus disorder prediction 578 611 - -
Sto2g2232 889 Pfam BES1/BZR1 plant transcription factor, N-terminal 674 747 IPR008540 -
Sto2g2232 889 PANTHER PROTEIN BZR1 HOMOLOG 3-LIKE 668 803 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2232 Sto-Chr2 36280717 36287726 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g2232 673 745 Glycoside Hydrolase AT2G45880 62.667 4.92e-21 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Sto2g2232 BES1_N 7.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2232 - - hbr:110662438 250.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g2232 2 36280717 36287726 Sto2g2232 2 36280717 36287726 ECH