Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2229 ATGGCTCTGTCTATGCACAAGGATTCAGCCAACAAGCAGATGGATTCCAGCAAGTATGTGAGGTATACGCCTGAGCAGGTGGAGGCTTTGGAGAGGGTTTATGCAGAATGCCCTAAGCCTAGTTCCTTGAGGAGGCAGCAGCTCATTAGGGAGTGTCCTATACTCTCTAATATTGAGCCCAAACAGATCAAAGTCTGGTTTCAGAATCGCAGGCTTCCTTCTTCTCCATCTGGATGCCGCGAAAAGCAGAGAAAGGAATCATCGCGATTGCAGACAGTGAATAGGAAGCTCACTGCCATGAACAAGTTGTTAATGGAAGAGAACGATCGACTGCAGAAGCAGGCATCTGCAACTACTACAGACAATAGCTGTGAGTCTGTGGTAATGAGTGGTCAGCAGCAACAACAGCAAAACCCAACACCTCAGCAACCCCAGAGGGATGCTAATAACCCAGCTGGTCTTCTCGCGATAGCTGAGGAGACCCTGGCAGAGTTCCTTTCCAAGGCTACTGGAACTGCTGTCGACTGGGTCCAGATGATTGGGATGAAGCCTGGTCCGGATTCTATTGGAATCGTAGCTGTTTCTCGCAACTGTAGTGGAGTAGCAGCACGAGCCTGCGGCCTCGTGAGTCTAGAGCCCACGAAGGTTGCTGAGATTCTCAAAGATCGTACATCATGGTATCATGACTGTCGCTGCCTTGATGTCTTGAGCATAGTCCCCACAGGAAATGGTGGAACAATAGAGCTCATGTACATGCAGACATATGCGCCTACGACATTGGCAGCAGCACGTGACTTCTGGACTCTCAGATACACTACCAATTTGGAAGATGGAAGTCTTGTGATTTGTGAAAGGTCATTGACGACTTCGACTGGTGGGCCCACAGGGCCTCCTGCTTCAAACTTTGTTAGAGCTGAAATGCTTCCTAGTGGATATCTAATTAGACCCTGTGAGGGTGGTGGATCCATTATTCACATTGTAGATCATGTGGATTTAGATGTTTGGAGTGTTCCTGAAGTGCTAAGGCCCCTCTATGAATCATCGAAAATCCTGGCTCAGAAAACGACTATTGCTGCCTTGCGACATATTAGGCAAATTGCTCAAGAATCAAGCGGAGAAATTCAATATGGTGGGGGCCGACAGCCCGCTGTTTTAAGGACATTCAGTCAGAGACTTTGCAGGGGATTTAATGATGCTGTGAATGGATTTGTGGATGATGGCTGGTCACTGATGGGTAGTGATGGAGCAGAAGATGTGACCATTGCCATCAACTCTTCTCCCAACAAATTTTTCGGGTCCCATTATGGGACATCAATGTTCCCCGCATTTGGAGGCGGTGTGTTGTGTGCCAAGGCGTCAATGCTGCTGCAGAATGTCCCTCCTGCTCTGCTTGTTCGTTTTCTGAGGGAGCATCGTTCAGAATGGGCTGATTATGGGGTTGATGCATACTCTGCCGCTTGTCTTAAGGCTAGTCCTTATGCAGTTCCCTGCGCACGGCCAGGTGGCTTCCCGAGCAGCCAAGTCATTTTACCGCTTGCTCATACTATTGAGCATGAGGAGTTCTTGGAGGTAGTTCGGATTGAAGGTCATGCATTTTCCCCTGAAGATGTGGCTCTGGCAAGGGATATGTATCTTCTGCAGCTGTGCAATGGAATTGATGAAAATTCAATTGGTTCGTGTGCTCAACTTGTGTTTGCACCTATTGATGAATCATTTGCTGATGAGGCTAATGGTGCTGCAGCGACGAAGACACTGGATTTGGCATCTACACTTGAAGCTGGATCCGGTAACGCCCGTGCTGCTGGCGAAGCTGATCCAAACAGTTACAACCTCCGGTCTGTCCTCACGATTGCGTTTCAATTCATGTTTGAGAACCATATGCGAGACAACGTGGCTGCCATGGCTCGCCAGTACGTCCGTAGCGTTGTGGGGTCTGTTCAGAGGGTTGCCATGGCAATTGCTCCATCCCGGGTCAGTCCTCAGCTAGGAGGGCCAAAGCCTCTCCCCGGTTCACCCGAGGCACTTACCTTAGCTCGATGGATCTGCCGAAGCTACAGGATTCACACTGGTGGAGAGATTTTCCGGGTCGAGTCTACTGCAACCGATGCAATCTTGAAGCAACTATGGCACCATTCTGATGCAATCATGTGCTGTTCTGCATCTCCAATATTTACGTTTGCAAACCAGGCCGGGCTCGACATGCTTGAAACCACTCTCATCGCTCTTCAAGACATAATGCTCGACAAAGTCCTCGATGAAGCTGGAAGGAAGATCCTCTGCTCTGAATTCTCCAAGATAATGCAACAGGGATTTGCGTATCTGCCGGGAGGAATATGTGTATCGAGTATGAACAGGCCGGTGTCGTATGAGCAAGCCATAGCCTGGAAGGTTCTGAATGATGAAGATTCCAATCACTGTCTTGCCTTCATGTTCATGAACTGGTCTTTtgtgtga 2454 0.4886 MALSMHKDSANKQMDSSKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRLPSSPSGCREKQRKESSRLQTVNRKLTAMNKLLMEENDRLQKQASATTTDNSCESVVMSGQQQQQQNPTPQQPQRDANNPAGLLAIAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRTSWYHDCRCLDVLSIVPTGNGGTIELMYMQTYAPTTLAAARDFWTLRYTTNLEDGSLVICERSLTTSTGGPTGPPASNFVRAEMLPSGYLIRPCEGGGSIIHIVDHVDLDVWSVPEVLRPLYESSKILAQKTTIAALRHIRQIAQESSGEIQYGGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSLMGSDGAEDVTIAINSSPNKFFGSHYGTSMFPAFGGGVLCAKASMLLQNVPPALLVRFLREHRSEWADYGVDAYSAACLKASPYAVPCARPGGFPSSQVILPLAHTIEHEEFLEVVRIEGHAFSPEDVALARDMYLLQLCNGIDENSIGSCAQLVFAPIDESFADEANGAAATKTLDLASTLEAGSGNARAAGEADPNSYNLRSVLTIAFQFMFENHMRDNVAAMARQYVRSVVGSVQRVAMAIAPSRVSPQLGGPKPLPGSPEALTLARWICRSYRIHTGGEIFRVESTATDAILKQLWHHSDAIMCCSASPIFTFANQAGLDMLETTLIALQDIMLDKVLDEAGRKILCSEFSKIMQQGFAYLPGGICVSSMNRPVSYEQAIAWKVLNDEDSNHCLAFMFMNWSFV 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2229 817 MobiDBLite consensus disorder prediction 77 91 - -
Sto2g2229 817 Gene3D - 9 89 - -
Sto2g2229 817 CDD homeodomain 18 71 IPR001356 GO:0003677
Sto2g2229 817 Pfam Homeodomain 18 71 IPR001356 GO:0003677
Sto2g2229 817 MobiDBLite consensus disorder prediction 111 149 - -
Sto2g2229 817 SMART HOX_1 15 88 IPR001356 GO:0003677
Sto2g2229 817 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 5 817 IPR044830 GO:0003700
Sto2g2229 817 Gene3D - 175 370 IPR023393 -
Sto2g2229 817 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 5 817 - -
Sto2g2229 817 CDD START_ArGLABRA2_like 151 367 - -
Sto2g2229 817 CDD bZIP 79 114 - -
Sto2g2229 817 SMART START_1 156 366 IPR002913 GO:0008289
Sto2g2229 817 Coils Coil 94 121 - -
Sto2g2229 817 MobiDBLite consensus disorder prediction 72 94 - -
Sto2g2229 817 SUPERFAMILY Homeodomain-like 18 72 IPR009057 -
Sto2g2229 817 Pfam MEKHLA domain 676 816 IPR013978 -
Sto2g2229 817 ProSiteProfiles 'Homeobox' domain profile. 13 77 IPR001356 GO:0003677
Sto2g2229 817 SUPERFAMILY Bet v1-like 157 368 - -
Sto2g2229 817 ProSiteProfiles START domain profile. 147 348 IPR002913 GO:0008289
Sto2g2229 817 Pfam START domain 157 364 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2229 Sto-Chr2 36231264 36237414 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g2229 5 817 Homeobox Transcription Factor Family AT2G34710 76.168 0.0 1320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Sto2g2229 START 4.5e-52 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2229 K09338 - qsu:112031480 1450.26