Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2179 TTGAATGGGACAATTCCTGAATTGCTTGGTGGTATAATAAGCATAGAGTTCTTGGATCTTTCCCAAAATTATTTGTCTGGAGTGATTCCAAAGTCCTTAGAGTCACTTGTCCATCTCAAATATATTAACCTTTCCTATAATTTATTGCATGGAGAAATTCCAAGTGGTGGGCCTTTTAGAAACTTTACAGCAGAATCTTTTGTGATGAATGAAGATCTTTGTGGGAAGCCCCAACTACGAGTCAAACCATGTAAAAAAGGAAGCGAACAGAGATCAACTAAAGACATGCTTTTGATCAAATGCTTATTGCCTATCATGTTCGCAGTGATTATAGTTGCTTCATGCATAATTTTTCTGAAACATAAGAGAAATTATGTTAATGATTCAACTAATAGGAATTTATTGAATTTGGAGATGCTAGCTAGGGTATTCTACTATGAACTTCTACAAGGAACAAATGGATTTGATGAGTGCAACTTTCTTGGACAAGGTAGTTTTGGATTTGTATACAAAGGTATTCTTTCAAGTGGACAGGTGGTTGCagttaaaatatttaacttaGACTTGGAAGAAGCTTCGAGGAGTTTTGATACTGAATGCACTGCCCTTTGCAATTTGCGTCATCGCAATCTCGTCAAGATCATTAGCAGTTGTTCAAATGTTGATTTTAAATCTCTAATAATGAAATTTATGCCAAATGGAAGTCTTGAAAGATGGCTATATTCTCATAACTACTGCTTAGATATCTTGCAAAGGTTGAACATAATGATTGATATAGCATCAGCATTGGAGTATCTTCATCATGGTTCTTCTACACCAATAGTTCATTGTGACGTAAAACCAAGCAATGTTTTGTTGGACGAAAATATGGTAGCTCATCTTAGTGATTTTGGAATTTCGAAACTATTAAGTGAAGAGAAAATGCAAATTTATATCAAGACCATTGCTACAGTTGGCTATATGGCGCCAGGGAGACCATCGTCAAATTGGTAA 993 0.3505 LNGTIPELLGGIISIEFLDLSQNYLSGVIPKSLESLVHLKYINLSYNLLHGEIPSGGPFRNFTAESFVMNEDLCGKPQLRVKPCKKGSEQRSTKDMLLIKCLLPIMFAVIIVASCIIFLKHKRNYVNDSTNRNLLNLEMLARVFYYELLQGTNGFDECNFLGQGSFGFVYKGILSSGQVVAVKIFNLDLEEASRSFDTECTALCNLRHRNLVKIISSCSNVDFKSLIMKFMPNGSLERWLYSHNYCLDILQRLNIMIDIASALEYLHHGSSTPIVHCDVKPSNVLLDENMVAHLSDFGISKLLSEEKMQIYIKTIATVGYMAPGRPSSNW 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2179 330 Gene3D Ribonuclease Inhibitor 1 93 IPR032675 -
Sto2g2179 330 SUPERFAMILY Protein kinase-like (PK-like) 137 323 IPR011009 -
Sto2g2179 330 ProSiteProfiles Protein kinase domain profile. 155 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g2179 330 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 1 323 - -
Sto2g2179 330 Gene3D Phosphorylase Kinase; domain 1 117 230 - -
Sto2g2179 330 SUPERFAMILY L domain-like 2 74 - -
Sto2g2179 330 ProSitePatterns Serine/Threonine protein kinases active-site signature. 274 286 IPR008271 GO:0004672|GO:0006468
Sto2g2179 330 Pfam Protein kinase domain 158 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g2179 330 PANTHER RECEPTOR-LIKE PROTEIN 55 1 323 - -
Sto2g2179 330 SMART serkin_6 155 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g2179 330 ProSitePatterns Protein kinases ATP-binding region signature. 161 183 IPR017441 GO:0005524
Sto2g2179 330 Gene3D Transferase(Phosphotransferase) domain 1 231 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2179 Sto-Chr2 35617127 35618536 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g2179 1 55 Receptor kinase-like Gene Family AT3G47570 43.636 4.06e-06 46.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Sto2g2179 Pkinase 2.6e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2179 - K13420 mtr:MTR_0070s0020 408.297