Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2127 ATGCTTCTCTCCATCTCATGGGTAATAATATCATCAGCAAGTGATAATAATATTGGAATAGCCCAACCTGGTTGCGATTGGTCATGTGGAGGCATACAAATCCCATACCCTTTTGGAATGAACGACCCCAGATGCTACATAGACAATTGGTTCGAGATAGAATGCAGGAAAAACAACTCTTCACCTTTCCTCAAGTCCATAAACGTGGAGGTGACGAGGTTCATAAACGACGACGTCGTCCAGATCCAGAACCCCGTCAATCGTTGGAACTGCCCAAACGACACAGAAAACGCCGAGTCCGTCGTGGACTTGAGGCTAAGCCCTTTCGTGTACTCCCAGGAGAGGAACAAGTTCGTGGCCATCAGTTGCGACAACCTCGTGCTCTTGGTGTCCCACAATGGGTCGGAAATCGGTGGGTGTGTCTCGATTTGTGGGGAGGAAGAGGAGGTGGGCCCACAGAAGGATAGGAATAATGATGACGTGGTCATTAGGGATGGTTGTCTCGGGAGATACTGCTGCCAGACGACGTTGCCGAGGTATCTGAACGAGTACAATACGACGTCGTTTTCGATCGAGGGAATCACGAACCAGAATGTTTCACCTGGCGAGTGTGGGTACGCGCTGATTGGAGATGATGATTGGATGAATAATAATGGGACGAGCAAGAGAGTGAGTGATATAAAGAAATTGGGTTATGTACCTGCGATGCTTGAATGGGAGATACCTGATCTGAATCTCACGTTGAATAATCCTCCAAATGCTATTTGCTCTGAATCTAATATTACATCTTCGGGTAAGAAGGGGTATAGATGTAAATGCAAGGATGGCTACTATGGCAATCCCTACATGTCCGATGGATGTACTCGTTTGCAATCCTCTGCTGACAAATATTCTATTACTTCACTTGTTCTTTCCACTAGCCTGGGATCCATTGCTTTCCTCGTCGGAATTTGGTGGTCGTACAAAATCATAAAGAGAAGAAGGATAAACAACCGAAAGAGAAAATACTTCAAACAGAATGGTGGATTGTTGTTACATCAAGGATTATCTTCCGGAGAtgtcaattttgacaaaaccAAGTTATTCACCTTAAAGGACTTGGAAAAAGCCACCAATCACTTCAGTGTGAACAGAGTCCTAGGCAATGGAGGCCAAGGTACAGTCTATAAGGGCATGCTTCTAGATGGTCAAATTGTTGCCGTCAAGAAGTTTAAGGTTCAAGGGAACGTTGAAGAGTTCATCAATGAAGTCCTTATTCTCTCCCAAATTAACCATAGGAATGTGGTGAAGTTGTTAGGGTTTTGCTTGGAGACTCGATTCCCTTTGTTAGTTTATGAGTTCATTCCTAATGGTAACCTTTATGAGTACTTACATGAGCAAAACGAGGAGTTTCCAATGACTTGGGAGACACGTTTGAGAATAGCCATTGAAGTCGCGGGAGCTCTATTTTACTTACACTCGGCTGCTTCTCAGCCAATTTATCATAGAGATGTCAAATCGACGAATATTCTTTTGGATGAAAAGTATAGAGCAAAAGTAGCCGATTTTGGGACATCGAGGATGGTTTCTATTGAAGATACTCATCTCACTACGCTAGTTCAAGGGACTTTTGGGTATTTGGACCCCGAATACTTCCATACTAGTCAGTTCACTGAGAAGAGTGATGTGTACAGTTTCGGTGTAGTTCTCGTAGAACTTTTGACCGGTCAGAAGCCGATATCTTCTTCTTGCTTGAGACCGGAGGAAGCTAAAAGCTTATCTTCATATTTCGTCATGTGCATGGAGGAAGATCGTCTGTGTGAGATTCTTGACAAAAGAATCGTGGAAGAAGGAAATAGAGATGATATCATGGCAGTTGGTAACCTTGCATGGAGATGCTTGGAATTGAATGGGAGGAAAAGGCCTACTATGAAAGAAGTCACAATGGAATTACAAGGAATTCAAAATTTGGGAAAGAggtctctttcttcttctataTCGTTGAAGAATCATGAAGCTTGGGATGCGATTTTCGCATCAACTAGTCCAATGGAGAGTGAAACATCCTCATCTTTGGAGATAACaccttttttttaa 2076 0.4239 MLLSISWVIISSASDNNIGIAQPGCDWSCGGIQIPYPFGMNDPRCYIDNWFEIECRKNNSSPFLKSINVEVTRFINDDVVQIQNPVNRWNCPNDTENAESVVDLRLSPFVYSQERNKFVAISCDNLVLLVSHNGSEIGGCVSICGEEEEVGPQKDRNNDDVVIRDGCLGRYCCQTTLPRYLNEYNTTSFSIEGITNQNVSPGECGYALIGDDDWMNNNGTSKRVSDIKKLGYVPAMLEWEIPDLNLTLNNPPNAICSESNITSSGKKGYRCKCKDGYYGNPYMSDGCTRLQSSADKYSITSLVLSTSLGSIAFLVGIWWSYKIIKRRRINNRKRKYFKQNGGLLLHQGLSSGDVNFDKTKLFTLKDLEKATNHFSVNRVLGNGGQGTVYKGMLLDGQIVAVKKFKVQGNVEEFINEVLILSQINHRNVVKLLGFCLETRFPLLVYEFIPNGNLYEYLHEQNEEFPMTWETRLRIAIEVAGALFYLHSAASQPIYHRDVKSTNILLDEKYRAKVADFGTSRMVSIEDTHLTTLVQGTFGYLDPEYFHTSQFTEKSDVYSFGVVLVELLTGQKPISSSCLRPEEAKSLSSYFVMCMEEDRLCEILDKRIVEEGNRDDIMAVGNLAWRCLELNGRKRPTMKEVTMELQGIQNLGKRSLSSSISLKNHEAWDAIFASTSPMESETSSSLEITPFF 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2127 691 Gene3D Phosphorylase Kinase; domain 1 348 447 - -
Sto2g2127 691 ProSiteProfiles Protein kinase domain profile. 374 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g2127 691 ProSitePatterns Serine/Threonine protein kinases active-site signature. 493 505 IPR008271 GO:0004672|GO:0006468
Sto2g2127 691 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 7 686 - -
Sto2g2127 691 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 7 686 IPR045274 GO:0007166
Sto2g2127 691 SUPERFAMILY Protein kinase-like (PK-like) 356 644 IPR011009 -
Sto2g2127 691 Pfam Wall-associated receptor kinase galacturonan-binding 25 72 IPR025287 GO:0030247
Sto2g2127 691 CDD STKc_IRAK 380 647 - -
Sto2g2127 691 Pfam Protein tyrosine and serine/threonine kinase 376 644 IPR001245 GO:0004672|GO:0006468
Sto2g2127 691 SMART serkin_6 374 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g2127 691 Pfam Wall-associated kinase 166 274 IPR013695 GO:0004674|GO:0016021
Sto2g2127 691 Gene3D Transferase(Phosphotransferase) domain 1 448 665 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2127 Sto-Chr2 35060740 35065659 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g2127 1 648 Receptor kinase-like Gene Family AT1G69730 43.383 1.49e-176 521
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Sto2g2127 PK_Tyr_Ser-Thr 2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2127 - - gmx:100798794 738.799