Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2095 ATGGCGAAGTTCTCGGTCAGTGGTGAAGATGATGGGGAAGGACCCAGCAACCCAACCCCAAAGAGACGCAGGATTGCTATTAGCTACTTCACCGACGGAGAAGACGACCGAGAAGACATCGGAAACCCTAGTGGAACTGAAGGCGAAGGTGATGTTTCTGCACAGGAATCACAACTGGTACAACGTGAAGAACATGTTGCAGATGATCAAGATCCTGTTGCCGAGAATTCTgatgattttttttggtttagaccCATATCGAACAATAACAGTGGAGAGAACGATGTTTCCGCGACGGAAAATAGGGATAGGTCAATTTCCGTCATGCTTACCGACCCTGATGTGCTTGATTGTTGCATTTGCTATGAGCCTTTGAGTATCCCTATTTTCCAGtGTGAGAATGGACATATTGCTTGTTCTTTCTGCTGTATCAAACTTATGAATAAGTGTCCCATGTGCTTTATGCCCATTGGCTATAACCGTTGCCGGGCGATTGAGAAGGTGCTGGAATCTGTTAAGGTATCCTGCCTAAATGCAAAATATGGTTGTAAAGAGACAGTATGTTACAGTAAGAAAAATGACCATGAAAAGGAATGCATTCATGCACCATGTACATGCCCACATTCAGGTTGCGACTTTGTTGCCTCATCCAAGGAGTTGACCCGACACTTCAAACGTAAACATGAGGGTTCTGCGATACATTTTACGTATGGCCACTTCTTTTCTGTCTTCCTAAAGGTCGCCGACAAAGTCGTTTTTCTTCAAGAGCAGAATGGTGCTGAACTTTTCATTCTCCACAGCAATGTGGAGAGTCTGGGGAATATAGTCAATATTAGTTGCATTGGCCCCAGTTCATTGAAAACGGTTTATCATTATGATATTTTGGCTAGATCTCAGGGATGCtgtctaaaattaaaatctttTGCCAAGAACACTCAGGACCTCAATGCCATTGATACTACCACTTCAACTGGGTTTCTTCTGATCCCATGTGGCTTTTTTAATTCTTCTGGACGGCTCAAACTTGAGATTTGCATAAGGTGTAATGTTGTTACTGATCTTGCAAATGTCCAATGA 1077 0.4197 MAKFSVSGEDDGEGPSNPTPKRRRIAISYFTDGEDDREDIGNPSGTEGEGDVSAQESQLVQREEHVADDQDPVAENSDDFFWFRPISNNNSGENDVSATENRDRSISVMLTDPDVLDCCICYEPLSIPIFQCENGHIACSFCCIKLMNKCPMCFMPIGYNRCRAIEKVLESVKVSCLNAKYGCKETVCYSKKNDHEKECIHAPCTCPHSGCDFVASSKELTRHFKRKHEGSAIHFTYGHFFSVFLKVADKVVFLQEQNGAELFILHSNVESLGNIVNISCIGPSSLKTVYHYDILARSQGCCLKLKSFAKNTQDLNAIDTTTSTGFLLIPCGFFNSSGRLKLEICIRCNVVTDLANVQ 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2095 358 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4 54 348 - -
Sto2g2095 358 Pfam Seven in absentia protein family 161 314 IPR018121 GO:0005737|GO:0006511|GO:0007275
Sto2g2095 358 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 166 224 IPR013083 -
Sto2g2095 358 MobiDBLite consensus disorder prediction 1 58 - -
Sto2g2095 358 ProSiteProfiles Zinc finger SIAH-type profile. 171 229 IPR013010 GO:0008270
Sto2g2095 358 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4 54 348 IPR044286 -
Sto2g2095 358 SUPERFAMILY TRAF domain-like 171 347 - -
Sto2g2095 358 MobiDBLite consensus disorder prediction 27 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2095 Sto-Chr2 34797779 34805080 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g2095 114 229 C3H Transcription Factor Family AT2G41980 36.441 2.96e-19 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2095 K04506 - gmx:100797881 353.599