Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2058 ATGATGATGAGAATGCCTAATTGTGATCATAAGGTGTTCTCAAACTTGGTTCAGAATCAGATCTCTCACAATGCTTCGCTCGATGATTCGCCGGCGGCGGCGACTCTGATGCAGGCAGTTAAGCCGCCGCCTGATGCCTCTGAAGATTCCGGCGGCCGGCAGATCTTAGCTTCATGGAATCCAGGTCTTAAGCGAAGTGAGAGGAAGAAGGAGGTGAAGAAGGTTGTGTGTATTCCAGCACCAGCAGCCGCAAATAGCAGAACAAGTGGAGAAGTGGTTCCTTCTGATTTGTGGGCTTGGAGAAAGTATGGTCAAAAACCTATCAAAGGCTCTCCTTATCCAagAGGGTATTATAGATGCAGCAGCTCAAAGGGTTGTTCAGCAAGAAAACAAGTAGAAAGAAGCAGGACGGACCCAAACATGTTGGTAATCACATACAACTCAGAGCACAATCATCCATGGCCAACCCAAAGAAACGCTCTTGCTGGTTCTGTGcgatctcatcatcatcattcaaaAACCAATAACGATTCTGATCAAACTATGGCATCAAAAGTAATAATGGACTTAAAGCAGCAGAAGAGTAACGTCGTCGCTGAAAACTGTGCGGCCGAAAGGTCGAGTAGTAGTAATAGTGGTAGTGCGTGtgcgtcgtcgtcgtcgttgaAACCGAAAcaagagatgatgatgatggatcaGAAGAGCAACGAAATGGACGGTGGAGATCAGTTGTTTGCTGAATTGGGTGAATTATTTATGGAAgctcatgatgatgatgatgatgatgatgatgatcatgaTCAATATCATTACCCTCTCAACCTTTTGGTGTCTCAAGGTTTTGATGATTATGctgctcatcatcatcatgaccATCACACACAGTGTAGGGGTTTAAATGATCCATTCCATGATGATCTATTTAATTCACTCTCATAA 939 0.3845 MMMRMPNCDHKVFSNLVQNQISHNASLDDSPAAATLMQAVKPPPDASEDSGGRQILASWNPGLKRSERKKEVKKVVCIPAPAAANSRTSGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYNSEHNHPWPTQRNALAGSVRSHHHHSKTNNDSDQTMASKVIMDLKQQKSNVVAENCAAERSSSSNSGSACASSSSLKPKQEMMMMDQKSNEMDGGDQLFAELGELFMEAHDDDDDDDDDHDQYHYPLNLLVSQGFDDYAAHHHHDHHTQCRGLNDPFHDDLFNSLS 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2058 312 Pfam WRKY DNA -binding domain 96 153 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto2g2058 312 SUPERFAMILY WRKY DNA-binding domain 92 155 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto2g2058 312 MobiDBLite consensus disorder prediction 149 163 - -
Sto2g2058 312 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 31 285 IPR044810 GO:0003700
Sto2g2058 312 MobiDBLite consensus disorder prediction 200 225 - -
Sto2g2058 312 ProSiteProfiles WRKY domain profile. 89 155 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto2g2058 312 Gene3D WRKY domain 68 147 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto2g2058 312 PANTHER WRKY TRANSCRIPTION FACTOR 14-RELATED 31 285 - -
Sto2g2058 312 SMART WRKY_cls 94 154 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto2g2058 312 MobiDBLite consensus disorder prediction 149 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2058 Sto-Chr2 34436244 34443157 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g2058 60 163 WRKY Transcription Factor Family AT2G34830 90.385 1.09e-63 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto2g2058 WRKY 1.2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2058 - - nnu:104590796 235.343