Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2029 ATGGGTTTCTTTTCTCAACTATCCCTTCCTTTTGCTTTTTATATcattcttttcctttcctcCCATTGCCTTCTTCTTCATGTCTCAACATCATCAACCACTCTAAGTATCACCACTGACACAGAAGCTTTGATCTCATTCAAGTCTCAATTGAGCAATGATCCTCCTCACCACCACCCATCATTATCTTCTTGGATCCAtaattcatcatcatcaccttgCAATTGGACTGGTGTAGTGTGCAACAATCTTGGCCAAAGAGTGATTGGCTTAAACCTTTCAGGCTTGAGACTCTCAGGTCAGCTAAGTCCTCACATAGGTAACCTCTCTTTTCTTGAGTCTCTCCAATTGCAAAATAACCAATTCACAGGAGTGATTCCTGAGCAAATTGGCAATCTTGGTCGGTTGAGAACTCTAAACATGAGTTTTAATAGACTAGAAGGAACGATTCCTCCGAACATCACTCGCTTAGCCGAACTCGTCGCGCTCGACTTGTCGTCCAACGAGATTGTCGGCCGAATTCCTCGAGATATTGGCACCTTCACAAAGCTTCAAGTCTTGAAATTGGGAAGCAATAACTTGTATGGTACAATACCACCAGGTTTAGGCAATATTTCATCTCTCACAAATATTAGTTTTGGCACAAACACTCTAAGTGGTGGGATTCCAAGTGAACTTGGTAGGCTTAAGAATCTAATTGAGCTTGATCTCATTATTAACAATCTCAATGGAATTGTTCCTCCTTCTATATATAACTTATCTTCCCTAGTTAACTTTGCTATAGCTTCCAACAATTTGTGGGGTGAGATTCCTAAGGATATTGGTCAAAAACTTCCAAAACTCATAATTTTCAATATTTGTTTTAACAAATTCAGAGGTAAAATTCCTGAGTCATTGCATAATATCACCAATATTCAAATCATTCGCATGGCTTACAATCTTTTAGAAGGATCAGTGCCATTAGGTCTTGGAAATCTCCCATTCCTTCATATGTATAATATTGGCTATAACAAGATAGATGTCTCAGAAGGTAGAGGCCTAGACTTCATTATTACTTCTTTGACAAATAGTACCCTCTTGAACTATCTTGCAATTGATGGCAATAGATTGGAAGGTGTGATCCCTGAGACCATTGGAAATCTCTCCAAGGTCCTCTCAAAATTGTACATGGGAGAGAATCATTTCCATGGAAACATACCCACATCGCTTGGAAATCTTAGTGGTTTGAGCTTATTAAACTTGAGTCACAATGATATCTCTGGGGAAATTCCTTTTGAGTTAAGCCAATTAGAGGGATTACAAGAGTTAAGCCTGGATGGAAATAAGATATCAGGAAGTATTCCAAACTCCCTAGGTAGTGGCCTCCAAAGATTAAATCATCTTGATTTGTCAAGCAATGAGCTTGTGGGTGAAATACCTTCTAGTTTTGGGAATTTTCAAAACCTTGTCTTCATGGACATATCTAACAATAAGCTCAATGGAAGCATACCTAGAGAAGTACTCAATCTACCAACTCTAAGTAATGTTTTGAATGTGTCTAAGAACCGTTTAAGTGGGTCTTTGCCTGAAAAAGTAGGGAGTTTGATTGGAGTTTCTACCTTAGATTTCTCTGACAACCTTTTATCTGGCGAAATACCTGCCTCAATAAGCAATTGTCTGAGCCTTGAAAATCTATTTTTGGCACGGAATTCGCTTTCTGGTTCGATTCCGAAAGAACTTGGGGACATCAAAGGATTGGAAACTCTGGACCTTTCTTCCAACCAACTCTTTGGATCCATTCCTATTGAACTTCAAAATCTAAATGCACTTCAGATATTAAACCTCTCTTATAATGATCTAGAAGGAGCCATTCCTAATGGTGGGGTTTTCCAAAACATCTCAGCACTCCATTTAGAAGGCACTATGAAACTTTGTTTGCTTTCCACATGTGGGACTCAAGAAGGTGGAAGAAAGATGTTCATAATCTATATCATCATTGCTATTGTGATAACATTGATACTATGCTTTACAATTGGCTTCTTGTTGTATGTAAAGAGCAGAAAGACAAGGGTAGCAGCATCATCTGAAATGTTAAAGCCACATCATCCAATGGTCTCTTACGACGAGCTTCGTCGGGCAACCGAGAATTTCGACCAAGAGAATTTACTAGGAACGGGAAGCTTTGGCTCAGTCTATAAAGGTCATCTAAGTCAATGGAATAGTAGTGCTGTTGCAATAAAAGTCTTAGACACTTTAAGAACTGGTTCTTTGAAGAGCTTCTTTGTAGAATGTGAAGTTTTGAAGCATACAAGGCACCGGAATCTAGTCAAGTTGATCACAACATGTTCTAGTATAGACTTCAAGAACAATGAATTTTTGGCTTTGGTTTATGAGTTCCTATGTAATGGCAGCTTGGAGGATTGGATTAAGGGAAAGAGAAGacatggaaatggaagtgggtTAGACCTTGTGGAGAGACTGAATATTGCTATTGATATTGCTTGTGCATTGGATTACTTGCACAATGACAATGAAACTCCTATTGTGCATTGTGACTTGAAGCCTAGCAATATACTTTTGGGTGAAGATATGATTGCAAAGGTGGGAGATTTTGGATTGGCTAGGTTGTTGGTTGAAAGGCCAACTATTGATGAAGTTTCAATAAGCTCCACTCATGTCCTTAGAGGTTCAATTGGTTACATACCACCAGAGTATGGATGGGGAGAAAAGGCATCATTTGCGGGAGATGTATATAGTTTTGGCACTGTATTACTAGAGCTCTTCTCTGGAAAGAGTCCAACAGATGATATCTTTACAGGAGGCTTAAGCCTAACTACATGA 2820 0.3816 MGFFSQLSLPFAFYIILFLSSHCLLLHVSTSSTTLSITTDTEALISFKSQLSNDPPHHHPSLSSWIHNSSSSPCNWTGVVCNNLGQRVIGLNLSGLRLSGQLSPHIGNLSFLESLQLQNNQFTGVIPEQIGNLGRLRTLNMSFNRLEGTIPPNITRLAELVALDLSSNEIVGRIPRDIGTFTKLQVLKLGSNNLYGTIPPGLGNISSLTNISFGTNTLSGGIPSELGRLKNLIELDLIINNLNGIVPPSIYNLSSLVNFAIASNNLWGEIPKDIGQKLPKLIIFNICFNKFRGKIPESLHNITNIQIIRMAYNLLEGSVPLGLGNLPFLHMYNIGYNKIDVSEGRGLDFIITSLTNSTLLNYLAIDGNRLEGVIPETIGNLSKVLSKLYMGENHFHGNIPTSLGNLSGLSLLNLSHNDISGEIPFELSQLEGLQELSLDGNKISGSIPNSLGSGLQRLNHLDLSSNELVGEIPSSFGNFQNLVFMDISNNKLNGSIPREVLNLPTLSNVLNVSKNRLSGSLPEKVGSLIGVSTLDFSDNLLSGEIPASISNCLSLENLFLARNSLSGSIPKELGDIKGLETLDLSSNQLFGSIPIELQNLNALQILNLSYNDLEGAIPNGGVFQNISALHLEGTMKLCLLSTCGTQEGGRKMFIIYIIIAIVITLILCFTIGFLLYVKSRKTRVAASSEMLKPHHPMVSYDELRRATENFDQENLLGTGSFGSVYKGHLSQWNSSAVAIKVLDTLRTGSLKSFFVECEVLKHTRHRNLVKLITTCSSIDFKNNEFLALVYEFLCNGSLEDWIKGKRRHGNGSGLDLVERLNIAIDIACALDYLHNDNETPIVHCDLKPSNILLGEDMIAKVGDFGLARLLVERPTIDEVSISSTHVLRGSIGYIPPEYGWGEKASFAGDVYSFGTVLLELFSGKSPTDDIFTGGLSLTT 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2029 939 Pfam Leucine rich repeat N-terminal domain 39 82 IPR013210 -
Sto2g2029 939 ProSitePatterns Protein kinases ATP-binding region signature. 716 740 IPR017441 GO:0005524
Sto2g2029 939 Gene3D Ribonuclease Inhibitor 38 195 IPR032675 -
Sto2g2029 939 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 26 938 - -
Sto2g2029 939 SMART LRR_typ_2 133 157 IPR003591 -
Sto2g2029 939 SMART LRR_typ_2 479 503 IPR003591 -
Sto2g2029 939 SMART LRR_typ_2 455 478 IPR003591 -
Sto2g2029 939 SMART LRR_typ_2 600 625 IPR003591 -
Sto2g2029 939 SMART LRR_typ_2 109 132 IPR003591 -
Sto2g2029 939 SMART LRR_typ_2 430 454 IPR003591 -
Sto2g2029 939 SMART LRR_typ_2 576 599 IPR003591 -
Sto2g2029 939 SMART LRR_typ_2 181 205 IPR003591 -
Sto2g2029 939 SMART LRR_typ_2 229 253 IPR003591 -
Sto2g2029 939 SUPERFAMILY Protein kinase-like (PK-like) 691 930 IPR011009 -
Sto2g2029 939 Pfam Leucine rich repeat 432 492 IPR001611 GO:0005515
Sto2g2029 939 Pfam Leucine rich repeat 112 170 IPR001611 GO:0005515
Sto2g2029 939 PANTHER OS04G0122200 PROTEIN 26 938 - -
Sto2g2029 939 SUPERFAMILY L domain-like 39 339 - -
Sto2g2029 939 Gene3D Phosphorylase Kinase; domain 1 691 792 - -
Sto2g2029 939 Gene3D Ribonuclease Inhibitor 196 347 IPR032675 -
Sto2g2029 939 ProSiteProfiles Protein kinase domain profile. 710 939 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g2029 939 SUPERFAMILY L domain-like 384 640 - -
Sto2g2029 939 Gene3D Transferase(Phosphotransferase) domain 1 793 938 - -
Sto2g2029 939 Pfam Protein tyrosine and serine/threonine kinase 713 930 IPR001245 GO:0004672|GO:0006468
Sto2g2029 939 Pfam Leucine Rich Repeat 579 600 IPR001611 GO:0005515
Sto2g2029 939 ProSitePatterns Serine/Threonine protein kinases active-site signature. 841 853 IPR008271 GO:0004672|GO:0006468
Sto2g2029 939 SMART serkin_6 710 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g2029 939 Gene3D Ribonuclease Inhibitor 348 646 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2029 Sto-Chr2 34070845 34074321 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g2029 6 937 Receptor kinase-like Gene Family AT5G20480 41.614 0.0 662
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Sto2g2029 PK_Tyr_Ser-Thr 5.4e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2029 - - gmx:100783512 1241.87