Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2019 ttggAGAGACCAATTAGGATATCTTACTATGAACTCTTACGAGGAACTAATGGATTTAATGAGAGCAATTTTCTTGGAAAGGGTAGTTTTGGTTCAGTATACAAAGGAGTTCTTTCAAGTGGGCAGCTGGTTGCAGTGAAAATATTTCACTTAGACTTGGAGGGTGCATTCAGGAGTTTTGATGCTGAATGTGTTGCTATTTGCAATTTGCGTCACCGTAATCTTGTTAAGATCATCAGTAGTTATTCAAATGTTGATTTTAAATCTCTGGTAATGGAATTTATGCCAAATGGGAGTCTTGACAGATGGTTGTATTCACATAACTATTGCTTAAATATCTTGCAAAGGTTGAACATAATGATTGATGTAGCAGCTGCATTGGAATATCTTCATCATGGTTCTTTTACGCCAACAATTCATTGTGATGTGAAACCGAGCAATGTTTTGTTGGATGAAGATATGGTGGCCCATCTTAGTGATTTTGGTTTGGCTAAACTATTAGGTGAGACGCAATTACAAATTTATACGGAGACTTTTGCTACAATTGGTTATATGGCACCAGAGTATGGATCCAATGGAGTTGTTTCTATTAAAGGAGATGTATACAGTTATGGTATTATGCTGATGGAAGTGTTTACAAGGAAGAAGCCAACAGATGATATGTTTATCGAAGGTCTAAATTTGAAAGATTGGGTTAGCAAATCAACCCCACATTCAATAATCAATGTTTTGGATGCAAACTTATTGCAGGGAGACCATCAAAATATTGGTAATACGTTGTTACATATACCATCAATTTTTGAGTTAGCATTGAATTGTTGTATTGATTTACCTGAGACACGAATCAATATGACTGATGTCGTGATGGCATTGAAAAAAATCAAAGTCATGTTTATGTAA 900 0.3511 LERPIRISYYELLRGTNGFNESNFLGKGSFGSVYKGVLSSGQLVAVKIFHLDLEGAFRSFDAECVAICNLRHRNLVKIISSYSNVDFKSLVMEFMPNGSLDRWLYSHNYCLNILQRLNIMIDVAAALEYLHHGSFTPTIHCDVKPSNVLLDEDMVAHLSDFGLAKLLGETQLQIYTETFATIGYMAPEYGSNGVVSIKGDVYSYGIMLMEVFTRKKPTDDMFIEGLNLKDWVSKSTPHSIINVLDANLLQGDHQNIGNTLLHIPSIFELALNCCIDLPETRINMTDVVMALKKIKVMFM 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2019 299 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 5 298 - -
Sto2g2019 299 PANTHER RECEPTOR-LIKE PROTEIN 55 5 298 - -
Sto2g2019 299 SUPERFAMILY Protein kinase-like (PK-like) 5 295 IPR011009 -
Sto2g2019 299 SMART serkin_6 19 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g2019 299 Pfam Protein kinase domain 20 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g2019 299 ProSiteProfiles Protein kinase domain profile. 19 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g2019 299 Gene3D Transferase(Phosphotransferase) domain 1 95 297 - -
Sto2g2019 299 Gene3D Phosphorylase Kinase; domain 1 2 94 - -
Sto2g2019 299 ProSitePatterns Protein kinases ATP-binding region signature. 25 47 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2019 Sto-Chr2 33941645 33942907 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g2019 6 298 Receptor kinase-like Gene Family AT3G47570 43.082 5.79e-78 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Sto2g2019 Pkinase 1.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2019 - K13420 mtr:MTR_8g470370 413.69