Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2011 ATGTTATTAATTAGCCACCATTTTGTATTTCTAGGGCCTATACCTAAGGAGATCGGCAATCTCAAGAAACTTGAGATATTAGAATTGACTGGCAACTATCTTAGCGGAGCTGTTTCATCCAATGTTTTCAACATTTCAACATTGATGTGGTTGAATTTTGGAGTTAATCATCTCTCTGGACAAATTCCACCGAATATAGGAAGTGGCCTTGCCAATCTGCATGTATTGGATCTAAACTCAAATCAATTTATAGGAAAAATTCCAAGTAGCATATCAAATGCTTCTAAGCTTGTTGGTTTATGGCTAGGCTTGAATAAATTTAGTGGAATTATTCCCAGTATACTTGGAAATTTAACCAACTTGATTGATTTAAGGTTAAATGGGAATGATTTGAATGGATTGATTCCTACTACAATTAATAAACTGCATGGTCTTCAATTTTTAGATCTTAATAACAATAGATTGAAAGGCTACGTCATTGATGGACTTTGCCAAATTAGACGTTTGAGTGAGTTGCATCTAGCCAATAATATGTTTACAGGATCAATTCCGAGGTGCCTTGAGAATCTTACTTCTTTGCaaaagttggatttgagttctaACAAATTAGTTTCTACTATACCCCATTCTTTTTGGAGTCTCAAAGATATCATTGGGGTTGATTTATCCTCCAATGCCTTGAATGGAACAATTCCACCTGAGATTTCGAGCTTGAGAGCGCTTACATGGTTGAACTTGTCAAACAATCAAATTACTGGAAACATTCCTCCAACCATTGGCGGCTTACAAACTTTACAAAGTTTATCTTTCGAGCATAACAAATTGCAGGGGTTAATTCCTGAATCATTTGGTAGTATGATAAGTATGGAGTTGTTGGATCTTTCCCAAAATTATTTGTCTGGAGTGATTCCAAAGTCCTTAGAGTCACTTGTCCATCTCAAATATATTAACCTTTCCTATAATTTATTGCATGGAGAAATTCCAAGTGGTGGGCCTTTTCAAAACTTTACAGCAGAATCTTTTGTAATGAATGAAGATCTTTGTGGGAAGCCCCAACTACGAGTCAAACCATCTAGGGTATCCTACTATGAACTTCTACAAGGAACAAATGGATTTGATGAGTGCAATTTTCTTGGACAAGGTAGTTTTGGATCTGTATACAAAGGAGTTCTTTCAAGTGGACAGATGGTtgcaattaaaatatttaacttaCACTTGGAAGAAGCATTAAGGAGTTTTGATATTGAATGCACTGCCATTTGCAATTTGCGTCATCGCAATCTTGTCAAGATCATCAGCAGTTGTTCAAATGTTGATTTTAAATCTCTAATAATGGAATTCATGCCAAATGGAAGTCTTGAAAAATGGCTATATTCTCATAACTACTGCTTAGATATCTTGCAAAGGTTGAACATAATGATTGATATAGCATCAGCATTGGAGTATCTTCATCATGGTTCTTCTACACCAATAGTTCATTGTGACGTAAAACCAAGCAATGTTTTGTTGGACGAAGATATGGTAGCTCATCTTAGTGATTTTGGTATTTCCAAACTATTAGGTGAAGAGAAATTGCAAATTTATACCAAGACCTTTGCTACAGTTGGCTATATGGCGCCAGAGTATGGATCCGAAGGAGTTGTTTCTATGAAAGGAGATGTATATAGTTATGGTATCATGTTGATGGAAGTGTTTACGCGGAAGAAGCCAATAGATGATATGTTTGTCGAAGGGAGACCATCAAATTGTTAA 1752 0.3516 MLLISHHFVFLGPIPKEIGNLKKLEILELTGNYLSGAVSSNVFNISTLMWLNFGVNHLSGQIPPNIGSGLANLHVLDLNSNQFIGKIPSSISNASKLVGLWLGLNKFSGIIPSILGNLTNLIDLRLNGNDLNGLIPTTINKLHGLQFLDLNNNRLKGYVIDGLCQIRRLSELHLANNMFTGSIPRCLENLTSLQKLDLSSNKLVSTIPHSFWSLKDIIGVDLSSNALNGTIPPEISSLRALTWLNLSNNQITGNIPPTIGGLQTLQSLSFEHNKLQGLIPESFGSMISMELLDLSQNYLSGVIPKSLESLVHLKYINLSYNLLHGEIPSGGPFQNFTAESFVMNEDLCGKPQLRVKPSRVSYYELLQGTNGFDECNFLGQGSFGSVYKGVLSSGQMVAIKIFNLHLEEALRSFDIECTAICNLRHRNLVKIISSCSNVDFKSLIMEFMPNGSLEKWLYSHNYCLDILQRLNIMIDIASALEYLHHGSSTPIVHCDVKPSNVLLDEDMVAHLSDFGISKLLGEEKLQIYTKTFATVGYMAPEYGSEGVVSMKGDVYSYGIMLMEVFTRKKPIDDMFVEGRPSNC 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2011 583 SUPERFAMILY L domain-like 95 352 - -
Sto2g2011 583 SMART LRR_typ_2 286 309 IPR003591 -
Sto2g2011 583 SMART LRR_typ_2 118 141 IPR003591 -
Sto2g2011 583 SMART LRR_typ_2 310 334 IPR003591 -
Sto2g2011 583 SMART LRR_typ_2 70 94 IPR003591 -
Sto2g2011 583 SMART LRR_typ_2 262 285 IPR003591 -
Sto2g2011 583 SMART LRR_typ_2 190 214 IPR003591 -
Sto2g2011 583 SMART LRR_typ_2 21 45 IPR003591 -
Sto2g2011 583 SMART LRR_typ_2 142 165 IPR003591 -
Sto2g2011 583 SMART LRR_typ_2 238 261 IPR003591 -
Sto2g2011 583 Pfam Protein kinase domain 375 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g2011 583 ProSiteProfiles Protein kinase domain profile. 372 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g2011 583 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 9 113 - -
Sto2g2011 583 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 114 358 - -
Sto2g2011 583 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 355 577 - -
Sto2g2011 583 PRINTS Leucine-rich repeat signature 145 158 - -
Sto2g2011 583 PRINTS Leucine-rich repeat signature 190 203 - -
Sto2g2011 583 SMART serkin_6 372 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g2011 583 ProSitePatterns Serine/Threonine protein kinases active-site signature. 491 503 IPR008271 GO:0004672|GO:0006468
Sto2g2011 583 Pfam Leucine rich repeat 264 323 IPR001611 GO:0005515
Sto2g2011 583 Pfam Leucine rich repeat 192 251 IPR001611 GO:0005515
Sto2g2011 583 SUPERFAMILY L domain-like 10 136 - -
Sto2g2011 583 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 355 577 - -
Sto2g2011 583 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 9 113 - -
Sto2g2011 583 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 114 358 - -
Sto2g2011 583 SMART LRR_sd22_2 70 96 - -
Sto2g2011 583 SMART LRR_sd22_2 262 280 - -
Sto2g2011 583 SMART LRR_sd22_2 21 47 - -
Sto2g2011 583 SMART LRR_sd22_2 142 165 - -
Sto2g2011 583 SMART LRR_sd22_2 190 222 - -
Sto2g2011 583 Gene3D Phosphorylase Kinase; domain 1 357 447 - -
Sto2g2011 583 Gene3D Ribonuclease Inhibitor 2 356 IPR032675 -
Sto2g2011 583 Gene3D Transferase(Phosphotransferase) domain 1 448 582 - -
Sto2g2011 583 SUPERFAMILY Protein kinase-like (PK-like) 353 574 IPR011009 -
Sto2g2011 583 Pfam Leucine Rich Repeat 72 93 IPR001611 GO:0005515
Sto2g2011 583 ProSitePatterns Protein kinases ATP-binding region signature. 378 400 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2011 Sto-Chr2 33825482 33827704 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g2011 12 575 Receptor kinase-like Gene Family AT3G47090 35.774 1.20e-101 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Sto2g2011 Pkinase 9.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2011 - K13420 twl:120014106 577.785