Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2009 ATGTGTCATCAACTTCCTTTACTTGAAGTTTTGAATTTAGCTGTGAATCAATTTGAAGGAAGCATTCCAACATCAATAAGCAATTGCACATCTTTAAAGATATTAGAATTGGATGGAAACTCATTTACAGGACTTATACCAAAGGAGATAGGCAATCTCAACAAACTTGAGATATTAGATTTGGCAAGCAACTATCTGAGTGGACCTATTTCATCCAATATTTGCAACATTTCAACATTGACATGGTTGAATTTTGGACATAATCATCTCTCTGGACCTATTCCCTCACATATAGGAAGTGGCCTTGACAACCTGAAGGAATTGTTTCTAGATTCAAATCAATTTACAGGAATAATCCCAAGTAGCATATACAATACTTCAAAGCTTATTCGTTTATGGCTAGGCTTGAATAAATTTAGTGGAATTATTCCCAATGTATTTGAAAATTTAACCAACTTGATCGATTTAAGGTTAAATGGGAATGATTTGAATGGATTGATTCCTGATACAATTAATAAGCTGCAAGATCTTCAATTTTTGGATCTAAGTAACAACAGACTGAAAGGCTATATCATAGATGGAATTTGCCAAATTAGAAGTTTAAGTGAGCTGCATCTAGCCTACAATATGTTTCAAAGATTCATTCCGAGGTGCCTTGAGAATCTTACTTCTTTACaaaagttggatttgagttctaACAAATTAGTTTCTAATATACCCCATTCTATTTGGAGTCTCAAAGATATCATTATGGTTGATTTATCCTCCAATGCCTTGGATGGAACAATTTCACCTGAGATTTCAAGCTTGAGAGCGCTTACATGGTTGAACTTGTCAAACAATCAAATTTCTGGAAACATTCCTCCAACCATTGGCagtttacaaactttacaaAGTTTATCTTTGGAGCATAACAAATTGCAGGGTTCAATTCCTGAATCATTTGGTAGTATGATAAATATGTTGTTCTTGGATCTTTCCCAAAATTACTTGTCTGGAGTGATTCCAAAGTCCTTAGAGTCACTTGTCTATCTCAAATATATTAACCTTTCCTATAATTTATTACATGGAGAAATTCCCAGTGGTGGGCCTTTTAAAAACTTTACGGCAGAATCTTTTGTGGTGAATAAAGATCTTTGTGGGAACCCCCAACTACGAGTCAAACCATGCAAAGAGGGACGCGGGCGAAGATCAACTAAAGACATGCTTTTGATCAAATGCTTATTGCCTATCATGTCCGTAGTGATTATAGTTGCTTCATGCATATTTTTTCTGAAACATAAGAGAAATGATGTTAATGATTCAACTAACTCGAATTTATTGAATTTGGAGAAGCTAGCTAGGGTATCCTACTATGAACTTCTACAAGGAACAAATGGATTTGATGAGTGCAATTTTCTTGGACAAGGTAGTTTTGGATCTGTATACAAAGGAATACTTTCAAGTGGACAAATGGTtgcaattaaaatatttaacttaGACTTGGAAGAAGCTTTAAGGAGTTTTGATACTGAATGCACTGCCATTTGCAATTTGCGTCATCGCAATCTCGTCAAGATCATTAGTAGTTGTTCAAATGTTGATTTTAAATCTCTAATAATGGAATTTATGCCAAATGGAAGTCTTGAAAGATGGCTATATTCTCATAACTACTGCTTAGATTTCTTGCAAAGGTTGAACATCATGATTGATATAGCATCAGCATTGGAGTATCTTCATCATGGTTCTTCTACACCAACAGTCCATTGTGACGTGAAACCAAGCAATGTTTTGTTGGATGAAGATATGGTAGCTCATCTTAGTGATTTTGGTATTTCCAAACTATTAGGTGAAGAGAAATTGCAAATTTATACCAAGACTTTTGCTACAGTTGGCTATATGGCGCCAGAGTATGGATCCAAAGGAGTTGTTTCTTTGAAAGGAGATGTATATAGTTATGGTATCATGCTTATGGAAGTGTTTACAAGGAAGAAGCCAACAGATGATATGTTTGTCGAAGGTCTAAGTTTGAAAGATTGGGTTAGCAAATCAACACCACATTCAATAATCAATGTTTTGGATGCAAACTTATTGAAAGGAGACCATCAAATTGGTAACATATTGTTACATATATCACAAATTTTTGAGGTAGCCTTGAAATGTTGTACCGATTTACCCGAGACACGAATGAATATGACAGATATTGTGGTGTCATTGAAAAAAATCAAAGCTATGTTTatgtaa 2223 0.3392 MCHQLPLLEVLNLAVNQFEGSIPTSISNCTSLKILELDGNSFTGLIPKEIGNLNKLEILDLASNYLSGPISSNICNISTLTWLNFGHNHLSGPIPSHIGSGLDNLKELFLDSNQFTGIIPSSIYNTSKLIRLWLGLNKFSGIIPNVFENLTNLIDLRLNGNDLNGLIPDTINKLQDLQFLDLSNNRLKGYIIDGICQIRSLSELHLAYNMFQRFIPRCLENLTSLQKLDLSSNKLVSNIPHSIWSLKDIIMVDLSSNALDGTISPEISSLRALTWLNLSNNQISGNIPPTIGSLQTLQSLSLEHNKLQGSIPESFGSMINMLFLDLSQNYLSGVIPKSLESLVYLKYINLSYNLLHGEIPSGGPFKNFTAESFVVNKDLCGNPQLRVKPCKEGRGRRSTKDMLLIKCLLPIMSVVIIVASCIFFLKHKRNDVNDSTNSNLLNLEKLARVSYYELLQGTNGFDECNFLGQGSFGSVYKGILSSGQMVAIKIFNLDLEEALRSFDTECTAICNLRHRNLVKIISSCSNVDFKSLIMEFMPNGSLERWLYSHNYCLDFLQRLNIMIDIASALEYLHHGSSTPTVHCDVKPSNVLLDEDMVAHLSDFGISKLLGEEKLQIYTKTFATVGYMAPEYGSKGVVSLKGDVYSYGIMLMEVFTRKKPTDDMFVEGLSLKDWVSKSTPHSIINVLDANLLKGDHQIGNILLHISQIFEVALKCCTDLPETRMNMTDIVVSLKKIKAMFM 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2009 740 Gene3D Transferase(Phosphotransferase) domain 1 537 739 - -
Sto2g2009 740 PRINTS Leucine-rich repeat signature 177 190 - -
Sto2g2009 740 PRINTS Leucine-rich repeat signature 222 235 - -
Sto2g2009 740 ProSiteProfiles Protein kinase domain profile. 461 740 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g2009 740 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 149 739 - -
Sto2g2009 740 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 7 147 - -
Sto2g2009 740 Pfam Protein kinase domain 464 728 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g2009 740 Gene3D Phosphorylase Kinase; domain 1 423 536 - -
Sto2g2009 740 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 7 147 - -
Sto2g2009 740 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 149 739 - -
Sto2g2009 740 Pfam Leucine rich repeat 104 163 IPR001611 GO:0005515
Sto2g2009 740 Pfam Leucine rich repeat 7 66 IPR001611 GO:0005515
Sto2g2009 740 Pfam Leucine rich repeat 296 355 IPR001611 GO:0005515
Sto2g2009 740 SMART serkin_6 461 739 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g2009 740 SUPERFAMILY L domain-like 103 371 - -
Sto2g2009 740 SUPERFAMILY L domain-like 4 150 - -
Sto2g2009 740 ProSitePatterns Protein kinases ATP-binding region signature. 467 489 IPR017441 GO:0005524
Sto2g2009 740 ProSiteProfiles Leucine-rich repeat profile. 272 294 IPR001611 GO:0005515
Sto2g2009 740 SMART LRR_sd22_2 222 241 - -
Sto2g2009 740 SMART LRR_sd22_2 174 197 - -
Sto2g2009 740 SMART LRR_sd22_2 102 128 - -
Sto2g2009 740 SMART LRR_sd22_2 53 79 - -
Sto2g2009 740 Gene3D Ribonuclease Inhibitor 101 391 IPR032675 -
Sto2g2009 740 Gene3D Ribonuclease Inhibitor 2 100 IPR032675 -
Sto2g2009 740 SMART LRR_typ_2 198 221 IPR003591 -
Sto2g2009 740 SMART LRR_typ_2 174 194 IPR003591 -
Sto2g2009 740 SMART LRR_typ_2 318 341 IPR003591 -
Sto2g2009 740 SMART LRR_typ_2 150 173 IPR003591 -
Sto2g2009 740 SMART LRR_typ_2 294 317 IPR003591 -
Sto2g2009 740 SMART LRR_typ_2 5 29 IPR003591 -
Sto2g2009 740 SMART LRR_typ_2 270 293 IPR003591 -
Sto2g2009 740 SMART LRR_typ_2 102 125 IPR003591 -
Sto2g2009 740 SMART LRR_typ_2 222 246 IPR003591 -
Sto2g2009 740 SUPERFAMILY Protein kinase-like (PK-like) 442 732 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2009 Sto-Chr2 33706669 33710778 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g2009 5 740 Receptor kinase-like Gene Family AT3G47570 36.209 5.64e-150 461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Sto2g2009 Pkinase 3.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2009 - K13420 gmx:100784397 749.969