Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2007 ATGAACAAATCCTTGGTCTTCAATATTTGGAACTTGCtagcaatttctttttcttcccttcCAATAGGACTTATACCTAAGGAGATAGGCAATCTCAACAAACTTGAGATTTTAGATTTGACAGACAACTATCTAAGTGGACATATTTCATCCAATGTTTTAAACATTTCAACATTGACGAGGTTGGGACTTGGATATAATGATCTCTCTGGACCTATTCTCCCAAATATAGGAAGTGGCCTTGCTAACCTAAAGGAATTGTCTCtatattcaaataattttacaGGAAAAATCCCAAAGAGCATATCCAATGCTTCTAAGCTTACAAGTTTAGTGCTGAGCTTGAATAAATTTAGTGGAATTATTCCCGATGTACTGGGAAATTTAACCAACCTGATCGACTTAAGGTTAGATGGGAATGATTTGAATGGTTTGATTCCTTCTACAATTAATAAACTGCAAGGTCTTCAACGTTTGGATCTTAGCGACAACATGTTGAAAGGCTACGTCATAGAAGGACTTTGTCAAATTAGAAGTTTGAGTGCGTTGTATCTAGCCCACAATGTATTTTCAGGATTGGTTCCAAGGTGCCTTGAGAATCTTACTTCTCTGCAAATGTTGGATTTAAGTTCTAACAAGTTGATTTCTTGTATACCCTCTTCTCTTTGGAATATTAAAGATATCTTGATGGTAGATTTATCCTCCAATGCCTTGAATGGAACAATTCCCCTTGAGATTTCAAGCTTGAGAGCACTTATATTGTTGAACTTATCAAACAATCAAATTTCAGGAAACATTCCTCCAACTATTGGTGACTTACAAACTTTACAAAACTTATCTTTAGAGAATAACAAATTGCAGGGGTCAATTCCTGAATCATTTGGTAAAATGATAAGCATGGAGTTCTTGGATCTTTCCGAAAATTATTTATCTGGAGTGATTCCAAAGTCCTTAGAGTCACTAGTCCATCTCAAATATATTAACCTTTCCTATAATTTATTGTATGGAGAAATTCCAAGCGGTGGGCCGTTTAGAAACTTTACAGCAGAATCTTTTGTGATGAATGAAGATCTTTGTGGGAAGCCCCAACTACGAGTCAAACCATGTAAAAAAGGAAGTGGGCATAGATCAACTAAAGGCATGCTTTTGATCAAATGCTTATTGCCTGTCATGCTGGCCGTGATTATAGTTGCTTCATGCATAATTTTTCTAAAACATAAGAGAAATGATGTTAATGATTCAACTAATAGGGATTTATTGAATTTGGAGATGCTAGCTAGGGTATCATACTATGAACTTCTACAAGGAACAAATGGATTTGATGAGTGTAATTTTCTGGGACAAGGTAGTTTTGGATCTGTATACAAAGGAATTCTTTCAAGTGGACAGATGGTTGCAGTTAAAGTATTTAACTTAAACTTGGAAGAAGCTTCAAGGAGTTTTGATACTGAATGCATAGCCATTTGCAATTTGCGTCATCGCAATCTCGTCAAGATCATCAGCAGTTGTTCAAATGTTGATTTTAAATCTCTAATAATGGAATTTATGCCAAATGGAAGTCTTGAAAGATGGCTATATTCTCATAACTACTGCTTAGATATCTTGCAAAGGTTGAACATAATGATTGATATAGCATCAGCGTTGGAGTATCTTCATCATGGTTCTTCTACACCTATAGTTCATTGTGACATAAAACCAAGCAATGTTTTGTTGGATGAAGAAATGGTTGCTCATCTTAGTGATTTTGGTATTTCCAAACTATTAGGTGAAGAGAAATTGCAAATTTATACCAAGACTTTTGCTACAGCTGGTTATATGGCGCCAGAGTATGGATCCGAAGGACTTGTGTCTATGAAAGGAGATGTATATAGTTATGGTATCATGCTGATGGAAGTGTTTACAAGGAAGAAGTCAATAGATGATATGTTTGTCGAAGGTCTAAGTTTGAAATGTTGGGTTAGCAAATCAACACCACATTCGATAATCAATATTTTGGATGCAAACTTATTGCAGGGAGACCATCAAATTGGTAACACATTGTTACATATATCATCAATTTTTGAGTTAGCCTTGAATTGTAGTACTGATTTACCCGAGACACGAATGAATATGGCTGATGTTGTGGTTTCATTGAAAAACATCAAAGCCATGTTTATGTAA 2160 0.3477 MNKSLVFNIWNLLAISFSSLPIGLIPKEIGNLNKLEILDLTDNYLSGHISSNVLNISTLTRLGLGYNDLSGPILPNIGSGLANLKELSLYSNNFTGKIPKSISNASKLTSLVLSLNKFSGIIPDVLGNLTNLIDLRLDGNDLNGLIPSTINKLQGLQRLDLSDNMLKGYVIEGLCQIRSLSALYLAHNVFSGLVPRCLENLTSLQMLDLSSNKLISCIPSSLWNIKDILMVDLSSNALNGTIPLEISSLRALILLNLSNNQISGNIPPTIGDLQTLQNLSLENNKLQGSIPESFGKMISMEFLDLSENYLSGVIPKSLESLVHLKYINLSYNLLYGEIPSGGPFRNFTAESFVMNEDLCGKPQLRVKPCKKGSGHRSTKGMLLIKCLLPVMLAVIIVASCIIFLKHKRNDVNDSTNRDLLNLEMLARVSYYELLQGTNGFDECNFLGQGSFGSVYKGILSSGQMVAVKVFNLNLEEASRSFDTECIAICNLRHRNLVKIISSCSNVDFKSLIMEFMPNGSLERWLYSHNYCLDILQRLNIMIDIASALEYLHHGSSTPIVHCDIKPSNVLLDEEMVAHLSDFGISKLLGEEKLQIYTKTFATAGYMAPEYGSEGLVSMKGDVYSYGIMLMEVFTRKKSIDDMFVEGLSLKCWVSKSTPHSIINILDANLLQGDHQIGNTLLHISSIFELALNCSTDLPETRMNMADVVVSLKNIKAMFM 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2007 719 Gene3D Ribonuclease Inhibitor 3 370 IPR032675 -
Sto2g2007 719 SMART LRR_sd22_2 32 55 - -
Sto2g2007 719 SMART LRR_sd22_2 81 107 - -
Sto2g2007 719 SMART LRR_sd22_2 153 176 - -
Sto2g2007 719 SMART LRR_sd22_2 201 217 - -
Sto2g2007 719 Gene3D Phosphorylase Kinase; domain 1 402 515 - -
Sto2g2007 719 SUPERFAMILY L domain-like 7 350 - -
Sto2g2007 719 SMART LRR_typ_2 81 105 IPR003591 -
Sto2g2007 719 SMART LRR_typ_2 249 273 IPR003591 -
Sto2g2007 719 SMART LRR_typ_2 177 200 IPR003591 -
Sto2g2007 719 SMART LRR_typ_2 321 345 IPR003591 -
Sto2g2007 719 SMART LRR_typ_2 297 320 IPR003591 -
Sto2g2007 719 SMART LRR_typ_2 32 56 IPR003591 -
Sto2g2007 719 SMART LRR_typ_2 153 176 IPR003591 -
Sto2g2007 719 SMART LRR_typ_2 129 152 IPR003591 -
Sto2g2007 719 SMART LRR_typ_2 201 225 IPR003591 -
Sto2g2007 719 SMART serkin_6 440 718 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g2007 719 ProSitePatterns Protein kinases ATP-binding region signature. 446 468 IPR017441 GO:0005524
Sto2g2007 719 ProSiteProfiles Protein kinase domain profile. 440 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g2007 719 Pfam Protein kinase domain 443 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g2007 719 Pfam Leucine Rich Repeat 83 104 IPR001611 GO:0005515
Sto2g2007 719 Gene3D Transferase(Phosphotransferase) domain 1 516 718 - -
Sto2g2007 719 SUPERFAMILY Protein kinase-like (PK-like) 422 711 IPR011009 -
Sto2g2007 719 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 8 124 - -
Sto2g2007 719 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 125 718 - -
Sto2g2007 719 Pfam Leucine rich repeat 275 334 IPR001611 GO:0005515
Sto2g2007 719 Pfam Leucine rich repeat 131 188 IPR001611 GO:0005515
Sto2g2007 719 PRINTS Leucine-rich repeat signature 156 169 - -
Sto2g2007 719 PRINTS Leucine-rich repeat signature 201 214 - -
Sto2g2007 719 ProSitePatterns Serine/Threonine protein kinases active-site signature. 559 571 IPR008271 GO:0004672|GO:0006468
Sto2g2007 719 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 125 718 - -
Sto2g2007 719 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 8 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2007 Sto-Chr2 33647807 33650384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g2007 13 719 Receptor kinase-like Gene Family AT3G47570 35.627 3.40e-143 443
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Sto2g2007 Pkinase 5.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2007 - K13420 gmx:100784397 713.375