Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g1975 atgatcttctcacgttcattTGAATTCGTGATTCACAATAACATGGCGTCCAGGAATCAACCTATTTCTTCCATGAACCCTATGCAGCACCGAGACACAACCATCAAAGTTCGTGTTGTTCGTTTGTTGTGTGTTCCGCCTTACTCCTCCAATACAAGCAAACCTAATCCAGGTGCTGTTGCAATTCAAATGTCTGCTACACATCAGTTTCATTCGAAGGCCTCTACTACAATTCCTGTAGACATCCGATTACACAATATTTTGGGGAACAGGTGGTCTACAATTGATGCTAGCTTGCTGGGAAGAACAAAGGACGAGATCAAGAACTATTGGAATACACACATCAAGAAGAGGTTAATGAAGATGGGGATTGATCTATCAATAAGTTGGCGTTGGGAATAA 402 0.398 MIFSRSFEFVIHNNMASRNQPISSMNPMQHRDTTIKVRVVRLLCVPPYSSNTSKPNPGAVAIQMSATHQFHSKASTTIPVDIRLHNILGNRWSTIDASLLGRTKDEIKNYWNTHIKKRLMKMGIDLSISWRWE 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g1975 133 SUPERFAMILY Homeodomain-like 83 124 IPR009057 -
Sto2g1975 133 PANTHER TRANSCRIPTION FACTOR MYB106 82 125 - -
Sto2g1975 133 CDD SANT 82 115 IPR001005 -
Sto2g1975 133 Gene3D - 67 128 - -
Sto2g1975 133 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 82 119 IPR017930 -
Sto2g1975 133 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 82 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g1975 Sto-Chr2 33130594 33131267 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g1975 82 125 MYB Transcription Factor Family AT4G05100 72.727 2.96e-17 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto2g1975 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g1975 K09422 - gmx:100820398 77.0257