Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g1920 ATGAACCTCTTCATCATCTTCCATCCTCCATTCTTGCTAATTCTCTCCTTCCTCTTTCGATATTCTTCGCCTTCTCACTCGCTTGACGTCATAACCCCAACCTACCCCCTCAAAGACGGCGCCGTTTTGGTCTCCAGCAATGCGACCTTCGCCCTCGGTTTCTTTAGCCCCAGCAACAGTTCTAGAAACCGCTACGTCGGGATTTGGTACAACAAAGTCTCGCAACGAACCGTCGTGTGGGTTGCTAACAGAGACGCTCCTTTGAAAGACGCTTCTGGAATCCTCTCGATCAACTCCCACGGAAACGTCGTCGTTTGCGAGAACTCGAGACCGAACGGTACCGTTGCGAACCCCGTTTGGTCTTCCAACGTCTCCCTCTCGTCATTCCCGTCTCCCAATTATGTTACCTCCGCGAAGCTTCTAGAAACGGGGAACTTCGTTTTGATGGGAGATGACGGCGGCGGCGGAAGCCAGAAGGTCTTATGGCAGAGTTTCGATCATCCCGGAGACACTCTTCTTCCCTTTATGAAACTCGGGTTGGACCGGAGGACCGGATTGAACCGGTTCCTCACGTCGTGGAAATCGCCGGTGGAACCAGGACTCGGGAACCTCACTTACCGAATCGACCCCACCGGCTTTCCTCAGTTATTCTTGTACAAAAACGGGTATCCACTATGGCGTGTCGGATCCTGGACGGGTCAGAGATGGAGCGGTGTGCCCGAGATGACGCCAAACTTCATCTTTAACGTAAGCTTCGTTGACGACGCCAACGAGGTTAGCATAATGTATGGAGTGAAGGACCCCAACGTATTCTCAATAATGGTGGTGGGTGACACTGGCCACGTCAGACGGTCCACGTGGCAGGCTCATGAACACAGATGGTTCCAAATCTGGTATGGTCCGAAAGAGGACTGCGATGGGTTTCGCCGGTGCGGGTCAAACAGTAATTGCAACCCGTATAATGCGGACAAGTTTGAGTGCGTGTGTCTGCCCGGATTCGAACCCAAATTTCCGCGCGAGTGGTATTTAAGAGACGGGTCGGGTGGGTGTGTGAGAAAGCAGAATGTGTCCACGTGTAGAAGTGGGGAGGGGTTTGTGAAGGTGGCACGTGTGAAGGTGCCCGATACGTCGAAGGCACGTGTGGATAGGAGATTGGGGTTAAAAGGGTGTAAGGAGAAGTGCTTGAGAGATTGTTCGTGTGTTGCGTATACAAGTGCGGATGAGAGAACACAGAGTGGGTGTCTGACGTGGCACGCCGACATGGAGGATATTAGGACGTATACAAGTGTGGGTCAAGATTTGTACGTGCGTGTAGATGCAGCTGAGTTAGCTAAATATGCAAAAAAGCCCTATGGTTCTCTTGGAAAGAAGGGGATGGTGGCACTTCTGGTCGTTTCTAGTGGCTTGATAATATTTCTGGTGGCCTCTTTCATATATTGGTTTGTAAAGAACCAGAGAAAAGAAAAAAGAAGACATAGCAAATCTTTGCTTAACTATAACTTTGAGGGCTCTCCCAGTATTCATGACCTTGACAGAGGACAAAATTCAGATTTACCATTCTTTGAATTGAGTGACGTAGCTGCAGCAACAGACCATTTTTCTAATGCTAACAAGCTTGGACAAGGCGGTTTTGGTTCTGTTTATAAGCTCAGGATCCTGAGTGATGAAGAAAAAAGGTTACTGTTGAATTGGAGGAAACGATTCGACATTATCTGTGGCGTGGCAAGAGGGATCTTATACCTTCATCGAGATTCAAGATTAAGAATCATTCACAGGGATCTAAAGGCTAGCAATGTCTTGTTGGACTCTGATTTGAACCCAAAAATTGCAGATTTCGGCATGGCTAGAATATTTGGTGGAGACCAAATTGAAGCAAACACAAATCGAGTTGTTGGAACCTATGGTTACATGTCACCGGAATATGCAATGAAAGGATTCTTTTCAATAAAATCTGATGTATACAGCTTCGGAGTTTTACTGTTAGAGGTCGTTACAGGCAAGAAGAATAACAGTGATTATGATGACATTACTTCAACTTTGGTCGGACATatttGGGACCTATGGAATGAAGGCAAAGCCATGGAAATTGTTGATCCATCAATACATGAGACGTGCCCTAAAGATGAAGTTATAAATTGTATCCAAATTGGACTTCTATGTGTACAAGATAATGCAGCAGATAGGCCAACTATGTCAACAGTTATTTCAATGTTGGGTAGTGATTCATCTCTTCCTTCTCCAAAGCAACCTGCATTTATTTCCAAGAGAAGCACTGCTTGTGATAGTTCAAATCCATCCACTAGTGAAGGAATAAATTCAGTAAATGATGTGAGTATTACTATGATTGAGGCTCGTTGA 2358 0.464 MNLFIIFHPPFLLILSFLFRYSSPSHSLDVITPTYPLKDGAVLVSSNATFALGFFSPSNSSRNRYVGIWYNKVSQRTVVWVANRDAPLKDASGILSINSHGNVVVCENSRPNGTVANPVWSSNVSLSSFPSPNYVTSAKLLETGNFVLMGDDGGGGSQKVLWQSFDHPGDTLLPFMKLGLDRRTGLNRFLTSWKSPVEPGLGNLTYRIDPTGFPQLFLYKNGYPLWRVGSWTGQRWSGVPEMTPNFIFNVSFVDDANEVSIMYGVKDPNVFSIMVVGDTGHVRRSTWQAHEHRWFQIWYGPKEDCDGFRRCGSNSNCNPYNADKFECVCLPGFEPKFPREWYLRDGSGGCVRKQNVSTCRSGEGFVKVARVKVPDTSKARVDRRLGLKGCKEKCLRDCSCVAYTSADERTQSGCLTWHADMEDIRTYTSVGQDLYVRVDAAELAKYAKKPYGSLGKKGMVALLVVSSGLIIFLVASFIYWFVKNQRKEKRRHSKSLLNYNFEGSPSIHDLDRGQNSDLPFFELSDVAAATDHFSNANKLGQGGFGSVYKLRILSDEEKRLLLNWRKRFDIICGVARGILYLHRDSRLRIIHRDLKASNVLLDSDLNPKIADFGMARIFGGDQIEANTNRVVGTYGYMSPEYAMKGFFSIKSDVYSFGVLLLEVVTGKKNNSDYDDITSTLVGHIWDLWNEGKAMEIVDPSIHETCPKDEVINCIQIGLLCVQDNAADRPTMSTVISMLGSDSSLPSPKQPAFISKRSTACDSSNPSTSEGINSVNDVSITMIEAR 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g1920 785 SUPERFAMILY Protein kinase-like (PK-like) 516 765 IPR011009 -
Sto2g1920 785 Pfam S-locus glycoprotein domain 226 337 IPR000858 GO:0048544
Sto2g1920 785 CDD B_lectin 34 168 IPR001480 -
Sto2g1920 785 Pfam D-mannose binding lectin 77 194 IPR001480 -
Sto2g1920 785 ProSiteProfiles Protein kinase domain profile. 424 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g1920 785 SMART ntp_6 360 438 IPR003609 -
Sto2g1920 785 Pfam Domain of unknown function (DUF3403) 741 785 IPR021820 GO:0004674
Sto2g1920 785 ProSitePatterns Serine/Threonine protein kinases active-site signature. 589 601 IPR008271 GO:0004672|GO:0006468
Sto2g1920 785 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 553 781 - -
Sto2g1920 785 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 42 549 - -
Sto2g1920 785 Gene3D Transferase(Phosphotransferase) domain 1 547 748 - -
Sto2g1920 785 PIRSF SRK 550 785 IPR024171 GO:0004674
Sto2g1920 785 PIRSF SRK 1 551 IPR024171 GO:0004674
Sto2g1920 785 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 197 IPR036426 -
Sto2g1920 785 ProSiteProfiles EGF-like domain profile. 301 339 IPR000742 -
Sto2g1920 785 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RKS1 553 781 - -
Sto2g1920 785 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RKS1 42 549 - -
Sto2g1920 785 Gene3D - 25 165 IPR036426 -
Sto2g1920 785 SMART blect_4 34 168 IPR001480 -
Sto2g1920 785 Pfam Protein tyrosine and serine/threonine kinase 561 738 IPR001245 GO:0004672|GO:0006468
Sto2g1920 785 ProSiteProfiles Bulb-type lectin domain profile. 28 161 IPR001480 -
Sto2g1920 785 ProSiteProfiles PAN/Apple domain profile. 359 439 IPR003609 -
Sto2g1920 785 Pfam PAN-like domain 359 424 IPR003609 -
Sto2g1920 785 SMART serkin_6 533 738 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g1920 785 CDD PAN_AP_plant 357 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g1920 Sto-Chr2 32323681 32328899 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g1920 521 785 Receptor kinase-like Gene Family AT4G23280 52.632 6.94e-85 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sto2g1920 PK_Tyr_Ser-Thr 1.1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g1920 - - gmx:100812814 1062.37