Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g1915 ATGGAGCAAACAAACttcaccttcaccttcaacattctcttctttcttactacttctttctctttcatttccttGTTTCCAAGAGTCTTACATGCAGGGGATACCATAACTTTCACACAATCCCTCACTAATAGCCACACACTTGTTTCATCTGCCAAAAAATTTGAGCTTGGTTTCTTCACTCCTGCTTCTTCCACTCACACATACCTTGGAATATGGTACAAGTACATTCCAAACCCTACAATTATTTGGGTTGCAAATAGAGACAACCCTCTTGTAAATTCCACTGGAACCTTAAAATTCAGCAATGACAGGAGGAACCTAGTCATTCTCAACCATAGAGGAAGTACCATATGGTCTTCTTCAACTTCAATCTCACCAAAACCAGCAAGAAAACCAGTGGCACAGCTTCTAGACTCTGGGAATTTGGTGTTGAAGGACctcgaaaaagaagaagaagaagatggaagcTATGTGTGGCAGAGTTTTGATTATCCCTCAGACACATTACTCCCAGGAATGAGACTTGGATGGAACTTCAAAACAGGCTTGAACAGGAAGTTAACATCTTGGAGAAGCAATGAGGATCCTTCTTCGGGCGAGTACGAGTACAGCGTCGATCCGCGCGGCCTTCCTCAGCTTCTTCTGTataaagggaagaagaagaagaacaagaagaaggtGTTTAGAAGTGGACCGTGGTTTGCACAGCAATTCAAGAGTGATCCAGTGCTCATGGGGAACCCAGTCTTCAAACCCATCTTTGTTTCTGATTCTGATGAAGTGTATTACTCCTATGAGATCAAGGACAATGTGACTTCCAGATTTGTGCTCACACAATCTGGCTTGATCCAACACTACTCATGGAATGACCTCCATTCAAAATGGGTCTCTGAGTTCACTGTTCAAGGAGGCCACTGTGATGACTATGGAATTTGTGGTGCTTTTGGAAGTTGCAGCAGCATGGAGGATTCTCCAATGTGCAAATGTTTGGATGGATTTGAGCCTAGATTTCCTCAGGAATGGAAATTGCTTGAGTTCTCAAAAGGGTGTGTGAGGAAGGATTCAGATATTTGTGGGAATAATAATGGAGAGGGATTGTTCAAGAAGCTTGCAGGAATGAAACTTCCAGATTCTCAAGTGTTCCACACAAACTCAAGCATGAGTATTGAGGAATGTGAAGCAGTGTGCTTGAAGAACTGTTCTTGTGTAGCTTTTGCTAAGCTTGATATTGATTTGAGTGGAAAAGGCTGTGTTGTTTGGTTTGGGGATTTATTGGATATCACAGAGGTTTCTGATTATGGGCAAGATTTATACATCAGAGTTTCAGCTTCAGAACTAGGTTCAAATGCAGATGacagaaaaaggaagaaacttATAATAATTCCAGTGGTTGCATCAGTAACTTCAGCAATGCTTGTCTTTCTAACATGGCTCATAATTACGAAATGGAGAAAAAATGGAGCTAGAGAACCAGATATtcaattaatacttaatagacCTAAAAGTGAAGTCCCATCATTTGAGATTGCCATTATTGAAGCTGCTACAAATAATTTCTCTGTCTTCAATAAGATTGGAGAAGGAGGATTTGGTCCTGTATACAAAGTTCTAAATCTAATTACTTTTTTCCCTATTTATTGCAGTGGATATATGCCTCCAGAATATGCGTTAGATGGACACTTCTCATTCAAATCTGATGTGTTTAGCTTTGGAGTTTTACTATTAGAACTATTGAGTGGCAAGAAAAACAAAGGGTTTTTTCATCCGGATCACAAACTGAATCTTCTTGGCCATGCATGGAAGCTTTGGATTGAAGAGAAGGCCTTGGAGGTGATGGATCCATTGCTTGAGGAAGAGTTTTGTGCATCTATGGCATTAAGGTGTATCCAAGTCGGACTTTCATGTGTTCAACAGAATCCAGAAGATAGGCCAAAAATGTCACAAGTGGTCTTGATGTTGGACAGTGATGATGAGAGTGTGTTTTGtcgttcttctttctcttgctTGCTTCGtgttcttttctacaattttctgCTATGGCTCGCATTCCTCGTCGTCGTATCCTTTCTCGCTGTGGTGGTTCTAGTCACTGCAGTATCTAGGGTAGATCTCTTGGCTAGAGATTCCATTAGTGAGGAATCTCTCAGGTCTTTTGCTAATGATTGTCCTACCGTCGACCTAGGAAAAGTTACTTATGAATCCCTTGTTTATCACCCTGAGGCAGAGGATTTCTTCGCTGCCTTAGAATGTTTGTGTCCCTTGCTTTTCCATTGGGGAGAAGGCATTGTGTTCAGGGATCTTCTCAAGAGAGTTAAGGCTGTCAATAATATAGTTTCCACTACTTCAGCCATGGTGATTGTCCTTCCCTTGTTCCTTGAGAATCCTTTCACATTCTCTTACTGTGTTGTTGGGTATCCTTTCGCGATGTCGTTGCTCTCCTTTGATGGGATTGGTTTTTTATTCTTCACCTATTTAGTACCTAATGTGTGGGTTTATCTCCGAGGCTTTGAAGAAGCCTTGGTTCAGACTTATGTGCAGTACGTGGCCTCAGCACACAGTGCCATGGTAGTTTATGTCGACTTGGTCAGTTCAAGCGAGCATTTGGGGGCATTGTTGGGTAGTCCAAGAGGCCTCCAGGTCTCTTCCTCATGGGAGGGTCAGGTGCCTATTGTTGCTGCGACTACTCAGAGCGTTGATGATGCGGTCGAGGGTGCTCTTCTATTGCGTCAGCCGGGAAAGGAGCCTGTCGAGGAAGAGGAGCCTCGAAAGAAAGCTAGGCGGGCTCCTCTTTCTTTAGAGGTTGACAACTTACCCTTTTCTTCCTTGATCGAGGATATTTTGTCCACCGAACAGTAG 2859 0.3994 MEQTNFTFTFNILFFLTTSFSFISLFPRVLHAGDTITFTQSLTNSHTLVSSAKKFELGFFTPASSTHTYLGIWYKYIPNPTIIWVANRDNPLVNSTGTLKFSNDRRNLVILNHRGSTIWSSSTSISPKPARKPVAQLLDSGNLVLKDLEKEEEEDGSYVWQSFDYPSDTLLPGMRLGWNFKTGLNRKLTSWRSNEDPSSGEYEYSVDPRGLPQLLLYKGKKKKNKKKVFRSGPWFAQQFKSDPVLMGNPVFKPIFVSDSDEVYYSYEIKDNVTSRFVLTQSGLIQHYSWNDLHSKWVSEFTVQGGHCDDYGICGAFGSCSSMEDSPMCKCLDGFEPRFPQEWKLLEFSKGCVRKDSDICGNNNGEGLFKKLAGMKLPDSQVFHTNSSMSIEECEAVCLKNCSCVAFAKLDIDLSGKGCVVWFGDLLDITEVSDYGQDLYIRVSASELGSNADDRKRKKLIIIPVVASVTSAMLVFLTWLIITKWRKNGAREPDIQLILNRPKSEVPSFEIAIIEAATNNFSVFNKIGEGGFGPVYKVLNLITFFPIYCSGYMPPEYALDGHFSFKSDVFSFGVLLLELLSGKKNKGFFHPDHKLNLLGHAWKLWIEEKALEVMDPLLEEEFCASMALRCIQVGLSCVQQNPEDRPKMSQVVLMLDSDDESVFCRSSFSCLLRVLFYNFLLWLAFLVVVSFLAVVVLVTAVSRVDLLARDSISEESLRSFANDCPTVDLGKVTYESLVYHPEAEDFFAALECLCPLLFHWGEGIVFRDLLKRVKAVNNIVSTTSAMVIVLPLFLENPFTFSYCVVGYPFAMSLLSFDGIGFLFFTYLVPNVWVYLRGFEEALVQTYVQYVASAHSAMVVYVDLVSSSEHLGALLGSPRGLQVSSSWEGQVPIVAATTQSVDDAVEGALLLRQPGKEPVEEEEPRKKARRAPLSLEVDNLPFSSLIEDILSTEQ 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g1915 952 CDD PAN_AP_plant 359 443 - -
Sto2g1915 952 Pfam S-locus glycoprotein domain 229 337 IPR000858 GO:0048544
Sto2g1915 952 Gene3D Phosphorylase Kinase; domain 1 484 540 - -
Sto2g1915 952 SUPERFAMILY Protein kinase-like (PK-like) 504 540 IPR011009 -
Sto2g1915 952 SUPERFAMILY alpha-D-mannose-specific plant lectins 82 197 IPR036426 -
Sto2g1915 952 Pfam Protein tyrosine and serine/threonine kinase 550 652 IPR001245 GO:0004672|GO:0006468
Sto2g1915 952 ProSiteProfiles Bulb-type lectin domain profile. 33 158 IPR001480 -
Sto2g1915 952 Gene3D - 28 163 IPR036426 -
Sto2g1915 952 CDD B_lectin 39 166 IPR001480 -
Sto2g1915 952 Pfam PAN-like domain 362 428 IPR003609 -
Sto2g1915 952 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 25 536 - -
Sto2g1915 952 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 549 658 - -
Sto2g1915 952 Gene3D Transferase(Phosphotransferase) domain 1 543 666 - -
Sto2g1915 952 SMART blect_4 39 166 IPR001480 -
Sto2g1915 952 Gene3D Hepatocyte Growth Factor 361 439 - -
Sto2g1915 952 SMART ntp_6 363 442 IPR003609 -
Sto2g1915 952 Pfam D-mannose binding lectin 81 192 IPR001480 -
Sto2g1915 952 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 549 658 - -
Sto2g1915 952 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 25 536 - -
Sto2g1915 952 CDD EGF_CA 307 337 - -
Sto2g1915 952 ProSiteProfiles EGF-like domain profile. 303 340 IPR000742 -
Sto2g1915 952 ProSiteProfiles PAN/Apple domain profile. 359 443 IPR003609 -
Sto2g1915 952 SUPERFAMILY Protein kinase-like (PK-like) 547 662 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g1915 Sto-Chr2 32284183 32294774 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g1915 542 657 Receptor kinase-like Gene Family AT4G23140 52.586 4.29e-34 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sto2g1915 B_lectin 2.9e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g1915 - - gmx:100804024 631.713