Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g1748 CTGGGGATAGAAGTTTCAATGGCGGAGGAGGAGGAAGCTTTGCCTGACCATCTGCGCTGTAGCCGCACCGACGGCCGACAATGGCGGTGCCGCCGGAGAGTGATGGAGAATCTGAGATTATGCGAGATTCACTATCTTCAAGGTCGTCATCGGCAATACAAGGAGAAGGTACCGGAGTCGCTGAAGCTTCAAAGGAAGCGGAAAAAGGGGCATAATAATAAGAACGAATCTGTTGTCCTCGACAATGTTGAAATTAGGGCACGGAAAGTGGGGAAGATGGCGAAGCTGATGAAAAAGAGGCGGAAATTCTCGGATTCTTCAGAAGCATTGGATGCATCTCCTgagaaggagttgCACTACACTGAGGGAGAGTTGACTAGAGAATTGCCCAACGGTGTAATGGCAATCTCTCCAGCATCATCACCTCAAGGTTACTTCAGGTCCAAGAATGTTGAGAGGCTTCCCGCTGGCAAGCTGCAGGTGGTACCTTTTGGGCGAAACCTGAAGAGATGTAGGAGGAAGAAGTGCCACTGGTGTCAGAGAAGCGATTCTTGGAGCCTCATCAAGTGCTCAAGCTGTCAAAAAGAATTCTTTTGTATGGATTGCATCAAAGAACGGTATTTTGATACTCAAAATGAAGTTAAGATGGCCTGTCCAGTTTGCCGGGGAACTTGCTCCTGTAAAAACTGCTCGGCAAGTCAATGTAAAGACAGTGAAAGTAAGGAATATTTGGCTGGTAAAAGCAGATCTGACAGAATTTTATGTTTTCACTATATGATCTGTAAGCTTCTTCCTGtactaaaacaaataaatgaaGACCAGAGTATTGAGCTAGAAGCAGAAGCTAAAACTAAAGGGAAAAGAATCTCTGACATTCACATCAAGCGGGTTGAGTTTGGTTGCAATGAACAAAATTACTGCAATCATTGCAAAATGCCGATTTTGGATCTCCATAGAAGCTGCTCTGGTTGTTCCTATAGCATTTGCATAAGTTGTTGTCAGGAATTAAGTCAAGGAAGCATCCCTGGAAGAATTAGCTCATCTTTGTCTAAGCTACCTCATAAAATAAAAGCAGGCACTGCCAGTGAAAACCACCTTTTGGATAAGGTCATTTTTAAGCGCAAATCGACTGCTACTTCATCATCACCTGACTGGACAAAATGTAATGGTACTGGCAATTTATCTTGCCCACCAACAGAACTTGGCGGTTGTGGTGATAGCCTCCTTGAGTTGAGATGTGTTTTCCCCTCATGTTGGATCAAAGAGATGGAAACAAAGGCAGAAGAAATAGTTTGCTGCTATGACTTCCCTGAAActttggataaaagttcaggcTGCTCAGTTTGTCTTGATACAGATCATAAAGTTGTCAAGTATAAGCAGTGGCAAGAAGCAGCACTCAGAGAAGATTCAAATGATAATTGCTTGTTTTATCCCAGAGTTTCGGACATTGGTTGTGATAATTTTGAACACTTTCAGAAGCACTGGGGAAAAGGCCATCCTGTAGTGGTGCGAGATGTTCTCCAAAGTAAATCAAATCACAGTTGGGATCCATTGGTCATGTTCTGTACTTATCTTGAGAGGAGCATTACAAGATTTGAGAATGATAAGGACTTACTTGAAGCTTGTTTGGATTGGTGTGAGGTGGAAATTAACATTAGGCAGTATTTTACTGGATCTCTTAGAAGTCAGCCGCAGAAAAATACTTGGCATGAGATGCTGAAATTGAAGGGCTGGCTGTCTTCTCAACTATTCAAAGAACAGTTTCCAACTCATTTTGCTGAAGTGATTGATGCTCTACCTCTTCAAGAATACATGAATCCCACGTGTGGTCTTCTGAACTTAGCTGCAAGTTTGCCACAAGGAAGTGCAAAGCATGACATTGGGCCATTTCTCTATATTTCATATGGCTGTGCTGGCGGACTAGCTGATTCTGTGTCAAAACTTTGTTATGATTCATATGATGTGGTTAATATTATGGCACATACCACGGATGTCCCTCTCTCTACAGAACAGCTTGCTAAAATAAGAAAGTTACTGAAAAAGCACAAAACTCTATGTCAAAAGGAGTCTTCTAAAATTATTACTGAGCCGATTGAAGATATAGAACAAAAAGGATTGCAGAGTATGGTTAGAGAAGAAATGAACTTCTTCCGGAGAGTCAATAGAACTGCTTGCATCACTACCAAGGCAGAAAAAGCAGCTAGTCAGAGTACAGACAGCAATATTTCTCAGGGTGGAGAATGTGATTCAGATTCTGAACCCTCTTTAATACATGGGACTGTTCAAAGCACTCAATTGTCTATGCATCATAATCATAGAAATCCCTATGAAAGCTCAAATAATggtgaaagaaataaaaagaatgcAGAGAGTTCTTGTGCCCAGTGGGATGTATTTCGCAGACAAGATGTTCCAAAGCTCATAGAATATCTTAAAAGACATTGTAATGATTTTTCTCGCACCAATGACTATCAGAAGCAGATGATTCACCCAATTCTGGATCAAAGCTTCTTTCTTGACAGTACTCACAAAATGAGGCTTAAAGAAGAGTTTAAAATTGAACCATGGTCTTTTGAGCAACATGTTGGAGAAGCTGTCATCATTCCTGCTGGATGTCCATACCAGATCAGGAATCCTAAGTGTTGTGTTCATGTGGTACTTGAATTTGTGTCCCCTGAAAATGTTACCGAGTGTATCCAGTTGACCAATGAAGTCCGCCTTCTTCCAAAAGGCCATGAAGCAAAAGTAGACAAGCTGGAGGTGAAGAAAATGGCCCTTTATAGCATGAGTACAGCAATAAAAGAAATACGAGAACTCACTTGCAAAACATGA 2835 0.4071 LGIEVSMAEEEEALPDHLRCSRTDGRQWRCRRRVMENLRLCEIHYLQGRHRQYKEKVPESLKLQRKRKKGHNNKNESVVLDNVEIRARKVGKMAKLMKKRRKFSDSSEALDASPEKELHYTEGELTRELPNGVMAISPASSPQGYFRSKNVERLPAGKLQVVPFGRNLKRCRRKKCHWCQRSDSWSLIKCSSCQKEFFCMDCIKERYFDTQNEVKMACPVCRGTCSCKNCSASQCKDSESKEYLAGKSRSDRILCFHYMICKLLPVLKQINEDQSIELEAEAKTKGKRISDIHIKRVEFGCNEQNYCNHCKMPILDLHRSCSGCSYSICISCCQELSQGSIPGRISSSLSKLPHKIKAGTASENHLLDKVIFKRKSTATSSSPDWTKCNGTGNLSCPPTELGGCGDSLLELRCVFPSCWIKEMETKAEEIVCCYDFPETLDKSSGCSVCLDTDHKVVKYKQWQEAALREDSNDNCLFYPRVSDIGCDNFEHFQKHWGKGHPVVVRDVLQSKSNHSWDPLVMFCTYLERSITRFENDKDLLEACLDWCEVEINIRQYFTGSLRSQPQKNTWHEMLKLKGWLSSQLFKEQFPTHFAEVIDALPLQEYMNPTCGLLNLAASLPQGSAKHDIGPFLYISYGCAGGLADSVSKLCYDSYDVVNIMAHTTDVPLSTEQLAKIRKLLKKHKTLCQKESSKIITEPIEDIEQKGLQSMVREEMNFFRRVNRTACITTKAEKAASQSTDSNISQGGECDSDSEPSLIHGTVQSTQLSMHHNHRNPYESSNNGERNKKNAESSCAQWDVFRRQDVPKLIEYLKRHCNDFSRTNDYQKQMIHPILDQSFFLDSTHKMRLKEEFKIEPWSFEQHVGEAVIIPAGCPYQIRNPKCCVHVVLEFVSPENVTECIQLTNEVRLLPKGHEAKVDKLEVKKMALYSMSTAIKEIRELTCKT 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g1748 944 ProSiteProfiles JmjC domain profile. 608 907 IPR003347 -
Sto2g1748 944 Pfam JmjC domain, hydroxylase 792 888 IPR003347 -
Sto2g1748 944 SMART cupin_9 589 907 IPR003347 -
Sto2g1748 944 ProSiteProfiles WRC domain profile. 14 60 IPR014977 -
Sto2g1748 944 PANTHER PROTEIN B160 9 943 - -
Sto2g1748 944 ProSiteProfiles Zinc finger RING-type profile. 176 222 IPR001841 -
Sto2g1748 944 SUPERFAMILY Clavaminate synthase-like 478 928 - -
Sto2g1748 944 MobiDBLite consensus disorder prediction 736 776 - -
Sto2g1748 944 Gene3D Cupin 481 916 - -
Sto2g1748 944 Pfam WRC 15 56 IPR014977 -
Sto2g1748 944 MobiDBLite consensus disorder prediction 736 788 - -
Sto2g1748 944 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 9 943 IPR045109 GO:0032454|GO:0033169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g1748 Sto-Chr2 29520207 29525888 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g1748 15 54 GRF Transcription Factor Family AT2G22840 47.500 5.29e-06 48.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Sto2g1748 JmjC 2.2e-10 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g1748 K15601 - gmx:100802129 1281.54