Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g1433 ATGGGCGATAATATGACAGCGGATATAGAACTTCCAGGCTTCCGATTTCACCCAACAGAAGAAGAATTACTTGATTTCTATCTCAAAAACATGATAGTTGGCAAGAAATTGCGTTTCGACATCATTGGCTTCCTCAACATTTATCACCATGATCCTTGGGACTTGCCTGgtcTGGCAAAGGTGGGAGAAAGAGAATGGTACTTCTTTGTGCCTAGAGACAAGAAGCATGGAAGTGGAGGAAGGCCTAACCGCACAACCCAAAAAGGGTTCTGGAAAGCCACTGGTTCGGACCGGAAAATCATAAGCTTATCGGACCCAAAGCGGGTAATCGGGTTGAGGAAGACCCTCGTTTTCTACCAGGGTAGAGCTCCCCGGGGCTCCAAGACCGATTGGGACATAGTGTTGTGCAAGATATACAGAAAGGCAACTTCGTTGAAAGTGTTGGAGCAGAGGGCAGCCATGGAAGAAGAGACAAAGCTGTTGGGGAATTCGCCTTGCAGTTCAAACGACACCCAAGAAGATAAACGACAAGTGTTTCTCAAGCAAGAAACAGAAGAAATATTGGAGTCACAGTTTGAGACGACATTACCACAACTTCTTGAAGAACACAAAACGACATGTAGCACAAGTACATTGACGGGGAAGACCAAGCTGGGGGAGCTACAACTGCAGGTGCAGCTACCTCAAATAACAAGCATGGACTGGAACCAAGATCCCTTCTGGGCTCAAATTAATAGCCCTTGGTTGTCCACTTTCACTACCAACATCttaaatttctaa 780 0.4538 MGDNMTADIELPGFRFHPTEEELLDFYLKNMIVGKKLRFDIIGFLNIYHHDPWDLPGLAKVGEREWYFFVPRDKKHGSGGRPNRTTQKGFWKATGSDRKIISLSDPKRVIGLRKTLVFYQGRAPRGSKTDWDIVLCKIYRKATSLKVLEQRAAMEEETKLLGNSPCSSNDTQEDKRQVFLKQETEEILESQFETTLPQLLEEHKTTCSTSTLTGKTKLGELQLQVQLPQITSMDWNQDPFWAQINSPWLSTFTTNILNF 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g1433 259 SUPERFAMILY NAC domain 11 141 IPR036093 GO:0003677|GO:0006355
Sto2g1433 259 Pfam No apical meristem (NAM) protein 12 131 IPR003441 GO:0003677|GO:0006355
Sto2g1433 259 Gene3D NAC domain 19 146 IPR036093 GO:0003677|GO:0006355
Sto2g1433 259 ProSiteProfiles NAC domain profile. 10 154 IPR003441 GO:0003677|GO:0006355
Sto2g1433 259 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 259 - -
Sto2g1433 259 PANTHER NAC TRANSCRIPTION FACTOR 29-LIKE 4 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g1433 Sto-Chr2 15526936 15528433 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g1433 5 253 NAC Transcription Factor Family AT2G17040 55.596 9.49e-96 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto2g1433 NAM 4.4e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g1433 - - gmx:100816770 344.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g1433 2 15526936 15528433 Sto2g1433 2 15526936 15528433 ECH