Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g1431 ATGTTTGCAAATGCGAAATCTAAGAACTCATTCAGGCCTTTCTCGTATTCAGGACTAAGTCGTGACTTTGTAATCCATGACTTATCCATGTCTAAAGCGTTGCTGAGAAACAGAGTTTCAGCGCAGCAAGCAAGGGAGAGGAAAAAGGCATACTTGATTGATTTGGAAGCAAAGGTTAAAGACTTGGACAAGAAGAATTCGTAG 204 0.4069 MFANAKSKNSFRPFSYSGLSRDFVIHDLSMSKALLRNRVSAQQARERKKAYLIDLEAKVKDLDKKNS 67
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g1431 67 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 27 67 IPR004827 GO:0003700|GO:0006355
Sto2g1431 67 SUPERFAMILY Leucine zipper domain 30 66 IPR046347 GO:0003700|GO:0006355
Sto2g1431 67 PANTHER TRANSCRIPTION FACTOR HY5-LIKE 31 67 - -
Sto2g1431 67 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 32 47 IPR004827 GO:0003700|GO:0006355
Sto2g1431 67 Coils Coil 45 65 - -
Sto2g1431 67 Gene3D - 31 67 - -
Sto2g1431 67 CDD bZIP_HY5-like 34 67 - -
Sto2g1431 67 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 31 67 IPR044280 GO:0000981|GO:0045944
Sto2g1431 67 Pfam bZIP transcription factor 32 67 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g1431 Sto-Chr2 15458656 15461667 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g1431 32 67 bZIP Transcription Factor Family AT5G11260 80.556 6.36e-13 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sto2g1431 bZIP_1 1.1e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g1431 K16241 - gmx:548004 64.6994