Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g1365 ATGGGTTGCTGCCAATCATCATTTCTGACCGAAACCCACCCTGAAAAGCAGCAAAATCAACAACCCAACCACCATAATACCCACAACCACATCCACACCCAACCACACCCACCTTCTTCTCTAACCGCCGCCGACccctccgccgccgccgccgccgccgttgGTGGTGTCCCTTCTTTCTCGGAGTTCTCTTTCTCAGAACTCAAAGCTGCCACCGATAATTTCAGCTCAGACTTTATTGTGTCTGAGAGTGGAGAGAAGGCCCCTAACCTTGTGTATAAGGGCCGCCTCCCCAATCGCCGTTGGATTGCCGTCAAGAAGTTCACCAAGGCTGCATGGCCTGATCCCAAGCAAtttgtgGAAGAGGCGTCTGGTGTTGGAAAATTGCGACATCGCAAGCTTGCTAACTTGATTGGCTATTGCTGTGATGGAGATGAGAGGCTGCTTGTTGCTGAATACATGCCCAATGATACTCTCGCCAAGCATCTTTTCCACTGGGAAAACCAGACCATTGAGTGGGCCATGCGCTTAAGAGTGGCTCTTTCTATTGCTGAAACTTTAAATTACTGTAGTTCTGAGGGCCGCCCTTTATACCATGATTTGAATGCTTATAGAGTTCTTTTCGATGAGGAAGGTGATCCACGTCTGTCATGTTTTGGTTTAATGAAGAACAGTAGAGATGGAAAAAGTTACAGCACGAATCTTGCATACACACCTCCTGAATACTTAAGAAATGgaaGGGTCACACCTGAAAGTGTCATTTACAGCTTTGGCACAGTTCTCCTAGACCTGCTAAGTGGGAAACACATCCCTCCAAGTCATGCACTTGACATGATACAGGGAAAAAACAACATGCTCTTAATGGATTCGCATTTGGAGGGGAAGTTTTCTACAGAAGAGGCAACAGTAGTTGTTAATCTTGCCTCTAAATGTCTGCAATATGAACCCAGGGAGCGGCCTGATACAAAAGATTTAGTCACAACACTTGCTCCATTGCAAACAAAACCTGATGTTCCTTCTTATGTTATGCTTGGAATTCCAAAGCATGAGGAAGCTCCATCTACCCCGCAACGCCCTCTTTCAGCAATGGGTGAGGCTTGTTCAAGGTTGGACCTCACTGCAATACATCAGATCTTGGTTGCGACTCATTACAGAGATGATGAAGGAACTAATGAGttGTCTTTCCAAGAGTGGACCCAACAGATGAGAGACATGTTGGAAGCAAGGAAGCGAGGAGACTATGCGTTCCGTGACAAAGATTTTAAGACAGCCATTGAAAATTATTCACAGTTTATCGATGTGGGAACAATGGTGTCGCCAACCGTTTTTGCTCGGCGTAGTCTATGCTATCTTTTATGTGATCAACCAGATCCTGCACTTAGAGATGCAATGCAAGCCCAATGTGTTTATCCAGACTGGCCCACAGCTTTTTATATGCAATCGGTTGCTCTTGAGAAGCTGGACATGCACAAGGATGCTACAGATATGTTAAATGAGGCCACTGCTTTGGAAGAAAAGAGGCAAAGAGGAGGCAGAGGATCATAG 1545 0.4447 MGCCQSSFLTETHPEKQQNQQPNHHNTHNHIHTQPHPPSSLTAADPSAAAAAAVGGVPSFSEFSFSELKAATDNFSSDFIVSESGEKAPNLVYKGRLPNRRWIAVKKFTKAAWPDPKQFVEEASGVGKLRHRKLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALSIAETLNYCSSEGRPLYHDLNAYRVLFDEEGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIYSFGTVLLDLLSGKHIPPSHALDMIQGKNNMLLMDSHLEGKFSTEEATVVVNLASKCLQYEPRERPDTKDLVTTLAPLQTKPDVPSYVMLGIPKHEEAPSTPQRPLSAMGEACSRLDLTAIHQILVATHYRDDEGTNELSFQEWTQQMRDMLEARKRGDYAFRDKDFKTAIENYSQFIDVGTMVSPTVFARRSLCYLLCDQPDPALRDAMQAQCVYPDWPTAFYMQSVALEKLDMHKDATDMLNEATALEEKRQRGGRGS 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g1365 514 Pfam Protein tyrosine and serine/threonine kinase 93 329 IPR001245 GO:0004672|GO:0006468
Sto2g1365 514 Gene3D Tetratricopeptide repeat domain 403 511 IPR011990 GO:0005515
Sto2g1365 514 MobiDBLite consensus disorder prediction 9 41 - -
Sto2g1365 514 Gene3D Phosphorylase Kinase; domain 1 53 153 - -
Sto2g1365 514 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK11 1 512 - -
Sto2g1365 514 SUPERFAMILY Protein kinase-like (PK-like) 59 339 IPR011009 -
Sto2g1365 514 ProSiteProfiles Protein kinase domain profile. 78 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g1365 514 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 512 IPR045845 GO:0004672|GO:0009742
Sto2g1365 514 SUPERFAMILY TPR-like 406 507 IPR011990 GO:0005515
Sto2g1365 514 Gene3D Transferase(Phosphotransferase) domain 1 155 345 - -
Sto2g1365 514 MobiDBLite consensus disorder prediction 9 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g1365 Sto-Chr2 14716103 14721685 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g1365 33 341 Glycoside Hydrolase AT3G07070 34.821 2.32e-47 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Sto2g1365 PK_Tyr_Ser-Thr 4.1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g1365 K14500 - gmx:100808907 881.708
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g1365 2 14716103 14721685 Sto2g1365 2 14716103 14721685 ECH