Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g1347 ATGCTTTCTTCGTTTTTTTACCTCTGTGATTTATGCATCACCACATTAGCTGGGGAACATCGTGTTCCTTCAGGCATGAGGACTGGGGCCACCTGGATTGGTAGTCTAGTAAACCCTGACGTTTCTCAATCTCATTCTGGCTTTGCTGGCATCGGGGAGAGAAGGTGCCCGATTCAAATGGGGAATTGCTGGGGTTCTCCAGCTGACAAACCAAGCACAAGCACTACCACAACTGATCACCTTAGTCCAGCTACACCGGGGACGTCCCGTACCACCAGCAACACTATAACGTCTTCTGGAAGTAGTAGCAGCTTCACAAATAGCCAGTTCTCGGTGTCGAGTGGCGGTGAATCTGAACCAAATGGGCAGATTTTGCCTACTCCGAATCTGAGGATCTTTACTTTTGCGGAATTGAAGACTGCAACTAAGAATTTTAGAGCTGATACAGTTCTTGGGGAGGGAGGATTTGGGAAAGTCTTCAAGGGTTGGCTTGAAGAAAAGGCAACGCCAAAGAATGGAAGTGGAACAGTCATTGCTGTGAAAAAATTAAACTCTGAGAGCTTACAAGGCTTTGAGGAGTGGCAGTCAGAAGTAAATTTTCTAGGACGGCTTTCTCATCCTAACCTTGTTAAGCTGTTGGGGTACTGTTGGGAGGAAACAGAGCTTCTTCTAGTTTATGAATTCATGCAAAGGGGCAGTTTGGAAAATCATCTATTTGGAAGGGGTTCTGCTGTTCAACCACTTCCTTGGGACATTAGGCTTAAGATTGCAATTGGGGCAGCTCGTGGCCTGGCATTCTTGCACACATCTGAGAAAGTAATCTACCGTGATTTCAAGGCCTCCAATATATTGCTTGATGGGTCTTATACTGCAAAGATTTCAGACTTCGGCTTGGCAAAGTTGGCCCCTTCAGCAAGTCAGTCTCATGTGACAACAAGGGTGATGGGCACATATGGTTATGCGGCTCCAGAGTATGTGGCAACGGGCCATCTTTATGTAAAGAGTGACGTGTATGGATTTGGAGTTGTTTTGGTTGAGATGCTAACAGCCCTACGGGCACTCGATCCAAACCGTCCAAGTGGGCAACATAATCTAGTGGACTGGGTGAAACCATACCTGCAAGACAGAAGAAAATTGAAGAGCATTATGGATTCTCGATTGGAGGGCAAGTATCCATCCAAGGCTGCATTTCGTATAGCTCAGCTTGCTTTAAAATGTATTGCATCTGAGCCCAAACAGCGGCCATCAATGAAGGAAGTTCTGGAGATCTTGGAGAGGATTCAAGCTGCCAATGAGAAACCTGTGGAGCCTAGATTCTCGTCTACTCGCACTGTGGCTCCCCATAATCCTCACCAACCTCTGCGCCATCGTTCTCACTGA 1380 0.4674 MLSSFFYLCDLCITTLAGEHRVPSGMRTGATWIGSLVNPDVSQSHSGFAGIGERRCPIQMGNCWGSPADKPSTSTTTTDHLSPATPGTSRTTSNTITSSGSSSSFTNSQFSVSSGGESEPNGQILPTPNLRIFTFAELKTATKNFRADTVLGEGGFGKVFKGWLEEKATPKNGSGTVIAVKKLNSESLQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEETELLLVYEFMQRGSLENHLFGRGSAVQPLPWDIRLKIAIGAARGLAFLHTSEKVIYRDFKASNILLDGSYTAKISDFGLAKLAPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEMLTALRALDPNRPSGQHNLVDWVKPYLQDRRKLKSIMDSRLEGKYPSKAAFRIAQLALKCIASEPKQRPSMKEVLEILERIQAANEKPVEPRFSSTRTVAPHNPHQPLRHRSH 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g1347 459 MobiDBLite consensus disorder prediction 433 459 - -
Sto2g1347 459 Pfam Protein tyrosine and serine/threonine kinase 148 424 IPR001245 GO:0004672|GO:0006468
Sto2g1347 459 CDD STKc_IRAK 151 427 - -
Sto2g1347 459 SUPERFAMILY Protein kinase-like (PK-like) 120 434 IPR011009 -
Sto2g1347 459 Gene3D Phosphorylase Kinase; domain 1 129 228 - -
Sto2g1347 459 PANTHER SERINE/THREONINE-PROTEIN KINASE PIX13-RELATED 87 434 - -
Sto2g1347 459 MobiDBLite consensus disorder prediction 66 125 - -
Sto2g1347 459 ProSitePatterns Protein kinases ATP-binding region signature. 151 182 IPR017441 GO:0005524
Sto2g1347 459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 273 285 IPR008271 GO:0004672|GO:0006468
Sto2g1347 459 Gene3D Transferase(Phosphotransferase) domain 1 229 445 - -
Sto2g1347 459 ProSiteProfiles Protein kinase domain profile. 145 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g1347 459 MobiDBLite consensus disorder prediction 62 125 - -
Sto2g1347 459 PANTHER OS01G0588500 PROTEIN-RELATED 87 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g1347 Sto-Chr2 14498238 14505738 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g1347 122 432 Receptor kinase-like Gene Family AT4G02010 50.633 7.88e-102 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Sto2g1347 PK_Tyr_Ser-Thr 1.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g1347 - - gmx:100305417 632.098