Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g1338 ATGCACAGAGTGCCAAACGTGCCTCGTCGATGGCAAATGCCAATTCCTAAAATCACTCTCAAACAATTCAGATTTCTTCTTGCGCGTCGCTCTAAGGCCCTCTCTCGCCTTCGCCCTCACGCCGCGACCACCACCCCCTCCTCCAACCCTAATCCTCGCTCTCCCTCTAACGGCCAAAATCAGATTCCTAAAACTGATAAACTGTCGCTTCCAATTGTTCAATCCAGACCAGTCAAGGTCGGCAATGGTAATAATGGAGAAGGTCCTTCTTCGCGGGAGGCCAAGGATCACAAGGAATCTAAACTCGTCGATGTTTCCATGAAGAAACCAGTTGATAGGTCTGATTCGTTGATCGATTCTAAAAATGATGTTTCGGGGAAAGCGTCTGAACAACCTGTCGATCGCGATGCTACTTTAATAGAAAAGAAGACTGAGACGAATCCATATCAACAGAGGAAGGGTTTAGGCCATGAGAATGAGATCCCAAGTACACAATGGATTACTGAGTTGGATAAGAGTTTCATCCCTGGAAAGGACACTTCAAACAATAATTATGACCTTCTTAAAGATATCGATCCAGTTGCCGCAAATAGAATGCATCCAAATAACCATAGAAAGATAAGTCAATACCTTAGTCTGTATGCTCGCACTGGAGTTCTTCCAAGCACAATGTTCCAAGGAAAGGTTGCAGAGAATTTATGTCCTGTCCTATCTTCAAATGCACGATTGGAAGCTTCAAATGTGCGATTGGAAGCTTCAAATGCACAGTTAAAATTAGAGATGCGAGGTGTCTTCAACATTCTCAAAAATATTATGGGAAATGTACCGTCTGAGTTTGCACATATGATAAATTCTGAGGTACCTGAAGCAAGTAATGGACAATCATCATTAGCAGGACATTCATTCTCAGCTAGTGAAGATCATCCCAATACATAG 936 0.4306 MHRVPNVPRRWQMPIPKITLKQFRFLLARRSKALSRLRPHAATTTPSSNPNPRSPSNGQNQIPKTDKLSLPIVQSRPVKVGNGNNGEGPSSREAKDHKESKLVDVSMKKPVDRSDSLIDSKNDVSGKASEQPVDRDATLIEKKTETNPYQQRKGLGHENEIPSTQWITELDKSFIPGKDTSNNNYDLLKDIDPVAANRMHPNNHRKISQYLSLYARTGVLPSTMFQGKVAENLCPVLSSNARLEASNVRLEASNAQLKLEMRGVFNILKNIMGNVPSEFAHMINSEVPEASNGQSSLAGHSFSASEDHPNT 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g1338 311 Coils Coil 240 260 - -
Sto2g1338 311 Pfam IPP transferase 179 228 - -
Sto2g1338 311 Gene3D - 169 228 - -
Sto2g1338 311 MobiDBLite consensus disorder prediction 90 120 - -
Sto2g1338 311 MobiDBLite consensus disorder prediction 38 68 - -
Sto2g1338 311 MobiDBLite consensus disorder prediction 34 133 - -
Sto2g1338 311 MobiDBLite consensus disorder prediction 290 311 - -
Sto2g1338 311 PANTHER TRNA (ILE)-LYSIDINE SYNTHASE 1 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g1338 Sto-Chr2 14363683 14367452 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g1338 175 257 C2H2 Transcription Factor Family AT2G27760 51.807 4.53e-21 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g1338 K00791 - gmx:100792690 99.3673