Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g1231 ATGTCTATGAGTTTCGTGCCGCCCGTCGGATTTCATAAATGTTGGAGCTTGGTCTGGAGAATTTCGAAGCCGATTCTACGTCCCATTAGCTTGATGATCAGAGATCCTCTCCAAGGCTTCGACCATTTGATGCATTCCTCCTTCGATGCAGCAATCACCGGGTTGGCAGGATCCTCCGCGACGCCTTCATCCAGGATCTCGTCATCAATATCCTCCATGATGTCCAGGTTCAGGTTCTCCCATGAGGAAGAAGCTTTAAGGAGTTTTGATACTGAATGCATTGCTATTTGCAATTTGCGTCATCGCAATCTCGTCAAGATCATCAGTAGTTGTTCAAATGTTGATTTTAAATCTCTAATTATGGAATTTATGCCAAATGGAAGTCTTGAAAGATGGCTATATTCTCATAACTACTGCTTAGATATCTTGCAAAGGTTGGACATAATGATTGATATAGCATCAACATTGGAGTATCTTCATTATGGTTCTTCTACACCAGTAGTTCATTGTGATGTAAAACCAAGCAATGTTTTGTTGGACGAAGATATGGTAGCTCATCTTAGTGATTTTGGTGTTTCCAAACTATTAGGTGAAGAGAAATTGCAAATTTATACCAAGACCGTTGCTACAGTTCGCTATATGGCGCCAGagtATGGATCCGAAGGAGTTGTTTCTATGAAAGGAGATGTATATAGTTATGGTATCATGCTGATGGAAGTGTTTACGCGGAAGAAGCCAATAGATGATATTGTCGAAGGTCTAAGTTTAAAAGATTGGTTTTTGGAGGAGGATCCGAAGCAAGAGAGAGCAGAAGAGGAAGATCCGATACCTGTAGTCACAAGAAAAGTGACATATGGtgagagaagaaaagaggaagagagagagagagagagagaagtgaagCCATCGCAGAAGAATAGGACTTGGAAGCCGTTGATGATTATGAAAGTGGGAGCTGCGATGGTAGTGGTGGAGGAGTTGAACATGCGGTGGTAG 996 0.3986 MSMSFVPPVGFHKCWSLVWRISKPILRPISLMIRDPLQGFDHLMHSSFDAAITGLAGSSATPSSRISSSISSMMSRFRFSHEEEALRSFDTECIAICNLRHRNLVKIISSCSNVDFKSLIMEFMPNGSLERWLYSHNYCLDILQRLDIMIDIASTLEYLHYGSSTPVVHCDVKPSNVLLDEDMVAHLSDFGVSKLLGEEKLQIYTKTVATVRYMAPEYGSEGVVSMKGDVYSYGIMLMEVFTRKKPIDDIVEGLSLKDWFLEEDPKQERAEEEDPIPVVTRKVTYGERRKEEEREREREVKPSQKNRTWKPLMIMKVGAAMVVVEELNMRW 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g1231 331 SUPERFAMILY Protein kinase-like (PK-like) 83 250 IPR011009 -
Sto2g1231 331 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Sto2g1231 331 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 82 268 - -
Sto2g1231 331 Gene3D Phosphorylase Kinase; domain 1 64 127 - -
Sto2g1231 331 PANTHER RECEPTOR-LIKE PROTEIN 55 82 268 - -
Sto2g1231 331 ProSiteProfiles Protein kinase domain profile. 37 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g1231 331 Pfam Protein kinase domain 87 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g1231 331 MobiDBLite consensus disorder prediction 280 305 - -
Sto2g1231 331 Gene3D Transferase(Phosphotransferase) domain 1 128 314 - -
Sto2g1231 331 SMART serkin_6 64 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g1231 Sto-Chr2 12184710 12191095 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g1231 85 253 Receptor kinase-like Gene Family AT3G47570 47.340 2.67e-51 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Sto2g1231 Pkinase 5.7e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g1231 - K13420 lja:Lj6g3v0938090.1 269.626