Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g1167 atgggttttggagTGAGGAAGTCGTACACAAACAAGAGCAAAAAAGATGGCTCTATCATGACGGTTCGATTCGTTTGTAACAAGGAAGGGTTGAGAGGGAAAGATAAAAGAGATCATCTTACTAAGAATCCCCGGCGAGAAACAAGAACAGATTGTAAGGTTAGAATGGGACTCACACATGTGGATGGAATATTTAGAATCTATGACTTCATAGAGGATCATAATCATGTTCTTCAAACTCCAAAAACAACTCATATGTTGGCCTCTCAACGAAAGATATCAAAAGTTCAAGCACTTGAGATTGAGTTGGCTGAAGATTCCGGGTTGCAACTAAGAACATCATATGAGTTGTCCAGCAGACATGCGGGCGGAAAAGATAATCTTGGCTACACTCGTTTAGATCAGAAAAACTATCTCCGAACTATAAGAAAAAGGAGTTTGATGTATGGGGAAGCTGGTTGGTTGCTAAGATATTTCAAAAAGCAGAACTTGAAAAATCCATCATATTACCATGATTATCAGATGGATAGTGAAGaacaaataactaatatattttgGGCTGACCCTAAAATGCTTTTGGACTACAGTTATTTTGGTGACGTGGTTTCTTTGGACACAACATATTGTATTAACAATGCACATAGGCCACTTGCtatattttcaggatttaatcaTTTCAGGGGAGTGGTGATTTTTGGAGCTGCTTTACTATATGATGAGACAGCGTCATCCTTTAAGTGGTTGTTTAAAACATTTTTGGAAGCAAATTTGCAGAAAAAGCCTCAGACCATATTCACTGACCAAGATCAAGCAATGGCTAAAGCATTACACGAGGTTATGCCTGAGGTTTGCCATGGATTATGCACTTGGCATTTGATGCAAAATGGCATCAAGCACTTGGGCAACTTGATGAAGAATGGATCTCACTTTTTAAAAGACTTTAAAACCTGTATGTTTGGATATGATGAGGAGGCACAATTTGAGGTTGCTTGGAGTAGGAGGTTCGAGCACTTCGGTATTTTGTGTTGTCATGCTTTGAAGGTGCTTGAAGTGAATGGAGTTATGACTATTCCTGATCAGTACATTTTGAAGAGATTGACTAAAGATGCTCGAAGTGGTGCTATAGAGGATGTTAATGGAAACAAAGTTGTGGAAGATCCTGATTCAGTTGGCACGATACGACATAGACAACTTTGGCCGAAGCTACAAGTCTCGGAGATTTTGTTGGAAACAAAAGATGTGAACAATGAGATAGATGATCCTATAGCACCAATTAGTGAATGCTTGTCACAACCAACAGGAATTAAGAAACGGCCTGGCACTAAAAGGAAGGGTCGTTACAAGTCTTGTCTTGATAGGAAAAAGAAGTCAAGTGTCAGAAATTCCCAAAGTCAAAGATCAATAGACAATGAAGCTGTAAATCAAGTGAACTTTGAGGTGCCTAAAATCTATGGGAATCAAGTGAACTTTGAGACGCCTCAAGGATCTAGCAATCAAATGAACTTTGAGGTGCCTCCAAATTTGGGGACTCAATTTAGTTTCACCAAGTTTTTGATGgaGCCATTCTCTACACAGTCACTTGAAGGATCAGAGTTCTATGGTGATTTTTCAAATGTCAATGACCAAAGCTAG 1632 0.3805 MGFGVRKSYTNKSKKDGSIMTVRFVCNKEGLRGKDKRDHLTKNPRRETRTDCKVRMGLTHVDGIFRIYDFIEDHNHVLQTPKTTHMLASQRKISKVQALEIELAEDSGLQLRTSYELSSRHAGGKDNLGYTRLDQKNYLRTIRKRSLMYGEAGWLLRYFKKQNLKNPSYYHDYQMDSEEQITNIFWADPKMLLDYSYFGDVVSLDTTYCINNAHRPLAIFSGFNHFRGVVIFGAALLYDETASSFKWLFKTFLEANLQKKPQTIFTDQDQAMAKALHEVMPEVCHGLCTWHLMQNGIKHLGNLMKNGSHFLKDFKTCMFGYDEEAQFEVAWSRRFEHFGILCCHALKVLEVNGVMTIPDQYILKRLTKDARSGAIEDVNGNKVVEDPDSVGTIRHRQLWPKLQVSEILLETKDVNNEIDDPIAPISECLSQPTGIKKRPGTKRKGRYKSCLDRKKKSSVRNSQSQRSIDNEAVNQVNFEVPKIYGNQVNFETPQGSSNQMNFEVPPNLGTQFSFTKFLMEPFSTQSLEGSEFYGDFSNVNDQS 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g1167 543 Pfam MULE transposase domain 201 295 IPR018289 -
Sto2g1167 543 Pfam FAR1 DNA-binding domain 1 79 IPR004330 -
Sto2g1167 543 PANTHER OS03G0181600 PROTEIN 1 337 - -
Sto2g1167 543 PANTHER OS03G0181600 PROTEIN 333 395 - -
Sto2g1167 543 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 337 IPR031052 GO:0006355
Sto2g1167 543 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 333 395 IPR031052 GO:0006355
Sto2g1167 543 MobiDBLite consensus disorder prediction 437 451 - -
Sto2g1167 543 MobiDBLite consensus disorder prediction 429 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g1167 Sto-Chr2 10505276 10507653 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sto2g1167 MULE 3.9e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g1167 - - ahf:112709060 454.136