Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g1146 TTGGATTTGACAGTGAACTATCTAAGTGGACATATTTCATCCAATCTTTTCAACATTTCAACATtgacaaaattgaaatttggaTCTAATAATCTCTCTGGACCTATTCCTCCAAATATAGGAAGTGGCCTTGCCAACCTGAAAGAATTGTTTCTACATTCAAATCAATTTAAAGGGAAAATCCCACAGAGCATATCCAATGTTTCAAAGCTTAATCGTTTAAGACTAGACTTGAATAAATTTAGTGGAATTATTCCAAATGCTCTTGGAAATTTAACCAACTTGATCGAATTAAGGTTAGATGGAAATGATTTGAATGGGTCCATTCCTGCTACAATTAATAAAATGCAAGGTCTTCAAATTTTGGATCTTAGTAACAACAAATTGAAAGGCTTTGTCATAGATGGAATTTGCGAAATTAGAAGCTTGAGTGAGTTGCATCTAGCCTACAATATGTTTTCAGGATTAGTTCCGAGTATGATAAGCATGGAGTTCTTGGATCTTTCCCAAAATTATTTGTCCGGAGTGATTCCAAAGTCCTTAGAGTCACTTGTCCATCTCAAATATATTAACCTTTCCTATAATTTATTGCATGGAGAAATTCCAAGTGGTGGGccttttataaattttacagCTGAATCTTTTGTGATGAATGAAGATCTTTGTGGAAAGCCCCAACTAGGAGTCAAACCATGTAAAAAAGGAAGCAGGCAGAGATCAACTAATGACATGCTTTTGATCAAATGCTTATTGCCTATCATGTTGGCGGTGATTCTAGTTGCGTCATGCTTactttttttgaaacataagggAAACGATGTTAATAATTCAACAAATACGGATTTATTGAATTTGGAGATGCTAGCTAGGGTATCCTACTATGAACTTCTACAAGGAACAAATGGATTTGATGAGTGCAATTTTCTTGGACAAGGTAGTTTTGGAACTGTATACAAAGGAATTCTTTCAAGTGGACAGATGGTTgcagttaaaatatataacatagACTTGGAAGAAGCTTTAAGGAGCTTTGATACTGAATGCATTGCCATTTGCAATTTGCGTCATCGCAACCTCGTCAAGATCATTAGCAGTTGCACAAATGTTGATTTTAAATCTCTAATTATGGAATTTATGCCAAATGGAAGTCTTGAAAGATGGCTATATTCTCATAACTACTGCTTAGATATCTTGCAAAGGTTGAACATAATGATTGATATAGCATCAGCATTGGAGTATCTTCATCATGGTTCTTCTACACCAATCGTTCATTGTGATGTAAAACCAAGCAATGTTTTGTTGGACGAAGATATGATAGCTCGTCTTAGTGATTTTGGTATTTCCAAACTATTAGGCGAAGAGAAATTGCAACTTTATACCTCGACTCTTGCTACAGTTGGCTATATGGCACCAGAGTATGGATCCAAAGGAGTTATTTCTATGAAAGGAGATGTATATAGTTATGGTATAATGTTGATGGAAGTGTTTACAAGGAAGAAGCCAACGGATGATATGTTTGTTGAAGGCCTAAGCTTGAAAGATTGGGTAAGCAATTCAACACCACATTCAATAGTGAAAGTTTTGGATGCAAACTTATTGCAGAGAGACCATCAAATTGTTTCTTGCTCGGTGGTTTTGGACTCTGCTATTGGAGTCAATTGGTTGTTCGAGCTGAAGGTTGCCATGGAGATGCAGGAAGAGGAGGTTCAGCTGGTCTGGAACAAGGAGACAGATTGTGAAGTAAGCAAGTACATGTTAGTTGGGAAGATCTTGGCAGAGAATGTGTTGAACAGAAAGGCGGTGATCTCGATGATAAAGAAAGGATGGAATTTGCATGATGGATTTAGCATTAGTGAAGCTGAAAGGGTTCAGAATGAGATGGGTGGGGAAGGAAGTATGTATGGTCCTGGATTAGGTGTATCGCCTGCTAAGGAGATAAAAGGGGCAATATGTATTATGAAGAAGGAGTATAAGGAATTGTTTATGAATAAGGTGGAAAACAAGGAGTTTAGAGGTGTGAGGGATGAAGAAATGAAGGAGAATGATGATGGTAGGGGAAAGGATGTTAATTGGAAGTTCTGTGTGCAAGATAAATTGAAGAAGAGAGTTGAGGATCAATGGAAAGATGTTAAGCTATGTAGGGAGGAAGGAGGGAGTGATTTGAGGAAGGCGAAGTCTGGGGAAGAAGAGGAGTTAGCTGAGAATTTGAAGAAGGTTGTTATTAAGAGAAAGGAGGATGAAGTGAAGTGTAATGCAGAAGTTAGAAGAGTTAAGAGGGAGGTGTATGTGCTAGAGAAAGAGATGTTTGCTGAAGGTAAGGATGATTTGACAGCTagtgagaagaagagaaggaagaagatgtcAAAAATGGTGTTTGAAAGTATTCAGCTTATTGAAGTTCCTATCACTAAAGGTGTTTGGGATGGCTTGGGGGTGGCCTTGATAGTGAAGGAGCTTAAAAGATTATGTAGGGAGTATAAGCCCTCAATTGTCTTCCTGATGGAGACAAGAATGAAGGAGAATAAGATGGAGAAGGTTAAAAGGAAGTGTTGTAATTTGCAAAATAATTTCTATGTGGATGTAGTAGGGAAATCTAAAGGTTTAGCTCTTTGTGCTCTTACTAAGCAAGAGAATTTGGAGGTGTGGAACAAATTGAGGAGGTTAAAGCTTGGGGATGATATGGCTTGGTTTTGTCTTGGGGATCATTGTCCACTTATCATTGATTTAAAGTATAAGTTGCAAAAGGTGAGGAAGTCTTTTAAATTTGATGCAATGTGGGTTGATCATAAGGATTGTTCGGAGGTTGTTGAGGATGGGTGGAAATGGGAGAAGAGAGATGGGCAGTTATCTGAGGAGTCTAGAGGAGACATCAGTGATATTTTAAAGAGAATTGAAGAACTTTGGGATTTGGAGGAGAAATATTGGCatcaagggtctagggtcaaATGGCTTCAAGCTGGAGACAAGAATTCGAGGTTCTTCCATCAGTCTACTATTCAAAGTAGGCAATCCAATAAGGTGTTAAGACTTAAAGGTAGTGTTGGGAATTGGATTGAGGATGAAGATTGCATTGTTATTGATGAGGATGTGCCTATGGAGGAGGTGAAGAAAGCAGCTTTTGAGCTTGGTGCTTCGAAAGCACCAGGGCTTGATGGTTTTTTCGGGAAGTTTTATCATGCTTCTTGGGAAATTGTTTGGGAGCAAGTGATTAATTCTGTGTTGGAGTTTTTTAATGGGAGGATGGTTGGTGATTTTAAACCTGGGAGAGGTTTGAAACAAGGGGAACCCTTATCCCCTTGTCTTTTTATCTTGGTGGCTGATGTATTGTATTCTATGCTTAATAATGCTGCTAGTGATGGTTTGCCGACCTTATGGGAGACATCTAAGGTGGTGGCTCTGGCTTTTGTGAAAGATAAGTTTCTCAATAAAATTCAAGGTTGGAAGAAGAGAATTTTGTCTCAAGCTGGAAGGGAAATTTTGATTAAGGCAGTGGCTTCTTTTGCTCCTAGTTCTCCTATGGGCTTTTAA 3528 0.3705 LDLTVNYLSGHISSNLFNISTLTKLKFGSNNLSGPIPPNIGSGLANLKELFLHSNQFKGKIPQSISNVSKLNRLRLDLNKFSGIIPNALGNLTNLIELRLDGNDLNGSIPATINKMQGLQILDLSNNKLKGFVIDGICEIRSLSELHLAYNMFSGLVPSMISMEFLDLSQNYLSGVIPKSLESLVHLKYINLSYNLLHGEIPSGGPFINFTAESFVMNEDLCGKPQLGVKPCKKGSRQRSTNDMLLIKCLLPIMLAVILVASCLLFLKHKGNDVNNSTNTDLLNLEMLARVSYYELLQGTNGFDECNFLGQGSFGTVYKGILSSGQMVAVKIYNIDLEEALRSFDTECIAICNLRHRNLVKIISSCTNVDFKSLIMEFMPNGSLERWLYSHNYCLDILQRLNIMIDIASALEYLHHGSSTPIVHCDVKPSNVLLDEDMIARLSDFGISKLLGEEKLQLYTSTLATVGYMAPEYGSKGVISMKGDVYSYGIMLMEVFTRKKPTDDMFVEGLSLKDWVSNSTPHSIVKVLDANLLQRDHQIVSCSVVLDSAIGVNWLFELKVAMEMQEEEVQLVWNKETDCEVSKYMLVGKILAENVLNRKAVISMIKKGWNLHDGFSISEAERVQNEMGGEGSMYGPGLGVSPAKEIKGAICIMKKEYKELFMNKVENKEFRGVRDEEMKENDDGRGKDVNWKFCVQDKLKKRVEDQWKDVKLCREEGGSDLRKAKSGEEEELAENLKKVVIKRKEDEVKCNAEVRRVKREVYVLEKEMFAEGKDDLTASEKKRRKKMSKMVFESIQLIEVPITKGVWDGLGVALIVKELKRLCREYKPSIVFLMETRMKENKMEKVKRKCCNLQNNFYVDVVGKSKGLALCALTKQENLEVWNKLRRLKLGDDMAWFCLGDHCPLIIDLKYKLQKVRKSFKFDAMWVDHKDCSEVVEDGWKWEKRDGQLSEESRGDISDILKRIEELWDLEEKYWHQGSRVKWLQAGDKNSRFFHQSTIQSRQSNKVLRLKGSVGNWIEDEDCIVIDEDVPMEEVKKAAFELGASKAPGLDGFFGKFYHASWEIVWEQVINSVLEFFNGRMVGDFKPGRGLKQGEPLSPCLFILVADVLYSMLNNAASDGLPTLWETSKVVALAFVKDKFLNKIQGWKKRILSQAGREILIKAVASFAPSSPMGF 1175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g1146 1175 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 1 88 - -
Sto2g1146 1175 Gene3D Phosphorylase Kinase; domain 1 267 378 - -
Sto2g1146 1175 ProSitePatterns Serine/Threonine protein kinases active-site signature. 422 434 IPR008271 GO:0004672|GO:0006468
Sto2g1146 1175 SUPERFAMILY Protein kinase-like (PK-like) 283 522 IPR011009 -
Sto2g1146 1175 Pfam Protein kinase domain 306 503 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g1146 1175 ProSitePatterns Protein kinases ATP-binding region signature. 309 331 IPR017441 GO:0005524
Sto2g1146 1175 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 88 - -
Sto2g1146 1175 ProSiteProfiles Protein kinase domain profile. 303 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g1146 1175 SMART serkin_6 303 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g1146 1175 Gene3D Ribonuclease Inhibitor 1 241 IPR032675 -
Sto2g1146 1175 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 85 543 - -
Sto2g1146 1175 Gene3D Transferase(Phosphotransferase) domain 1 379 558 - -
Sto2g1146 1175 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 85 543 - -
Sto2g1146 1175 SUPERFAMILY L domain-like 1 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g1146 Sto-Chr2 10211358 10218932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g1146 1 534 Receptor kinase-like Gene Family AT3G47570 39.731 3.99e-112 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Sto2g1146 Pkinase 2.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g1146 - K13420 lja:Lj6g3v0938090.1 559.296