Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g1116 ATGGCGACGGAGGATAACGAGAGCTGTGCGAGTAGAGTTCAGGACGCGTCGTCGTCGCCGCCGGCGCAAACGCGGCAGCAACGGCAGAAGCTTGAAGTGTACAATGAGGTTCTCCGTCGCCTCAAGGATTCCGATAACGAAGAGGCTACGCAGCCTGGCTTCGACCATCAGCTCTGGGCTCACTTCAACCGCCTTCCTGCACGGTATGCACTGGATGTGAATGTGGAAAGGGCCGCTGATGTTCTGATGCACAAGAGACTGTTGCATTTGGCACACGATCCTGCTAATAGGCCTGCAATTGAAGTTCGCCTGGTCCAGGTTCAACCCACATCTGATGGAAATTTAGCTAACTCTATCAATTCTGAAGCTCCTGATAAAGAAACTGATCAAATCTCTTCAAAGTACTTAGGGAGACAGAGTATACATCCACCTCCTGCTTTTGGTTCTTCTCCTAACCTTGAGGCCCTGGCACTTGAAGCAACTAAATGTGAAGATCTAGAGGAGGAACACTCTGTGCATGCCGGGGAACAATATTCACGGCCCATGCATGAAATCACCTTCTCAACAGAAGACAAGCCAAAGCTACTCAGTCAGTTAACTTCTTTGCTTGCTGAGATTGGACTGAACATTCAAGAGGCACATGCTTTTTCGACTACTGATGGTTACTCATTAGATGTGTTTGTTGTTGATGGATGGCCCTATGAGAGACAGGCATGGCCTATTCGACAATCAGTATCTTCTGTTGGTGAATCTGATCAAACAGGGGTGAAATGCGAACCTGATCATTTGACAATACCTAGTGATGGGATGGATGTTTGGGAAATAGATCCTAGTCATTTGAAATTTGGAAATAAAATTGCATCTGGATCATATGGTGATCTATTTAAAGGCACATATTGTAGTCAGGAGGTGGCCATAAAAGTTCTCAAGGCTGAGAATGTAAATTCAGATTTGCAGAGTGAGTTTACACAAGAAGTCTATATCATGAGAAAGGTTCGGCACAAGAATGTTGTACAATTCATAGGAGCATGTACCAAGCCACCATATCTGTGCATAGTAACAGAATTTATGTCTGGTGGAAGTGTGTATGACTACTTACATAAGCAAAAGGGAGTTTTTAAATTTCCATCCCTGCTCAAAGTAGCAATTGATGTTTCTAAGGGAATGAACTACTTGCACCAAAATAACATTATCCATAGAGACTTGAAGGCTGCAAATCTTTTGATGGATGAAAATTGTGTTGTGAAGGTTGCTGATTTTGGGGTTGCTAGAGTAAAATCTCAATCAGGAGTTATGACAGCAGAAACTGGAACATATCGATGGATGGCTCCTGAGGTTATAGAACACAAGCCATATGATCACAAGGCTGATATATTTAGTTTTGGTGTTGTTCTGTGGGAGTTGCTCACTGGAAAGCTTCCATACGAGTATTTGACTCCACTACAGGCAGCTATAGGAGTGGTTCAAAAGGGTCTGCGACCCACCATCCCCAAGAACACTCATCCAAAGTTTGTAGAGCTTCTTGAGAGGTGTTGGCAGCAAGATCCAACATTAAGACCTGATTTCTCGGAAATTATTGAAATCCTGCAGCAGCTGTCTAAGGAGGTTGGAGATGGAGAGGATCCGCGCAAGGAAAAATCTGGAGGGATTTTCTCTGTCCTCAGACGAGGCCATCACTAA 1680 0.4435 MATEDNESCASRVQDASSSPPAQTRQQRQKLEVYNEVLRRLKDSDNEEATQPGFDHQLWAHFNRLPARYALDVNVERAADVLMHKRLLHLAHDPANRPAIEVRLVQVQPTSDGNLANSINSEAPDKETDQISSKYLGRQSIHPPPAFGSSPNLEALALEATKCEDLEEEHSVHAGEQYSRPMHEITFSTEDKPKLLSQLTSLLAEIGLNIQEAHAFSTTDGYSLDVFVVDGWPYERQAWPIRQSVSSVGESDQTGVKCEPDHLTIPSDGMDVWEIDPSHLKFGNKIASGSYGDLFKGTYCSQEVAIKVLKAENVNSDLQSEFTQEVYIMRKVRHKNVVQFIGACTKPPYLCIVTEFMSGGSVYDYLHKQKGVFKFPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENCVVKVADFGVARVKSQSGVMTAETGTYRWMAPEVIEHKPYDHKADIFSFGVVLWELLTGKLPYEYLTPLQAAIGVVQKGLRPTIPKNTHPKFVELLERCWQQDPTLRPDFSEIIEILQQLSKEVGDGEDPRKEKSGGIFSVLRRGHH 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g1116 559 CDD STKc_MAP3K-like 286 529 - -
Sto2g1116 559 Gene3D Phosphorylase Kinase; domain 1 269 358 - -
Sto2g1116 559 SUPERFAMILY Protein kinase-like (PK-like) 263 529 IPR011009 -
Sto2g1116 559 ProSiteProfiles ACT domain profile. 184 256 IPR002912 -
Sto2g1116 559 Gene3D Transferase(Phosphotransferase) domain 1 359 547 - -
Sto2g1116 559 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 15 541 - -
Sto2g1116 559 PANTHER SERINE/THREONINE-PROTEIN KINASE STY46-LIKE ISOFORM X1 15 541 - -
Sto2g1116 559 SMART serkin_6 280 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g1116 559 ProSiteProfiles Protein kinase domain profile. 280 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g1116 559 SUPERFAMILY ACT-like 182 237 IPR045865 -
Sto2g1116 559 Pfam Protein tyrosine and serine/threonine kinase 280 529 IPR001245 GO:0004672|GO:0006468
Sto2g1116 559 PRINTS Tyrosine kinase catalytic domain signature 354 367 IPR001245 GO:0004672|GO:0006468
Sto2g1116 559 PRINTS Tyrosine kinase catalytic domain signature 391 409 IPR001245 GO:0004672|GO:0006468
Sto2g1116 559 PRINTS Tyrosine kinase catalytic domain signature 437 447 IPR001245 GO:0004672|GO:0006468
Sto2g1116 559 PRINTS Tyrosine kinase catalytic domain signature 456 478 IPR001245 GO:0004672|GO:0006468
Sto2g1116 559 PRINTS Tyrosine kinase catalytic domain signature 500 522 IPR001245 GO:0004672|GO:0006468
Sto2g1116 559 ProSitePatterns Serine/Threonine protein kinases active-site signature. 397 409 IPR008271 GO:0004672|GO:0006468
Sto2g1116 559 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g1116 Sto-Chr2 9862910 9873174 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g1116 4 558 MAP Kinase Kinase Kinase AT4G35780 64.974 0.0 729
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Sto2g1116 PK_Tyr_Ser-Thr 5.6e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g1116 - - gmx:100805180 924.465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g1116 2 9862910 9873174 Sto2g1116 2 9862910 9873174 ECH