Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g1110 ATGGATTCACTTAGAAAGTCCTTCAAATCCTATTATTCCTACAAACATCCCATGAACATAGGCCCCCACTCTGGTCACGAACAGCTTCCCATTCTCTTGGATCAGGAATCTTCCGACGATCATCTCCGGCGCCACCATTCTCCGCCGCCGCCGTCGTCAATGACATCCGCCACTCCCACGGCGCACCGTCCTGAAGTTATTGTTAAAATCGACGAGGGCGAGTCCAAGAGCCCCGCTGCTCCACAAGGTAACAAGATTTGGAGAGAGACGAGCTACGATTTCTGGAATGACGGGAAGAGCGATGGGAGTGGTGCTAGTGGTATGGACGACGATGGCGGGTTTAATTTCCGGCAGCAAGGCCAGGGCTCCGAGGATCCGCCGTCCATGCTCATTGGTAAGTTCTTGCATAAACAGAAGGCCTCCGGCGACATGTCGCTGGATATGGATTTGGAAATGGAGGAGCTCCGGCATGAGCACGAGCATCACAAGTTGCCTCCGGTGGATGAGTCGCCGCAGCTCAATCGGATTTCCAAGGACCTCAAGGTCTCGTTCGAGGAGCCTGCTTCCAATGTCGTTGAAGTGGCAGGCGATTCCGTGAGACGAAGATATAATAAGGACTCTTCGGGTCAAGCGGAATTTCAGAAATCGCCGCATGATCATCGTGCGTCTCCAGGTGGTGTGGTAGCTCAAGGTGGTGGTGATGGCGAAGTTGTGAGATGTACATCGAACGCCTCTTTTGAGAGGAATGTTTCGATGCAGAGGAAATCTGCGTTGCTGAAGGTCAAAACCAAGTCAAGATTGCTGGACCCACCGGAGGAGCCGGACCGGCGGTCCGGTAGGGTGCCGAAATCGGGGCAAATGGTGTCGGGGTTGCTGGGGAGAAGAGGAGGAGAGGATGACGAAGACGATCCATTCTTGGAAGAGGACCTGCCAGATGAGTACAAAAAGACTCATTTCAGCATATGGGTTCTGCTTGAGTGGTTGAGTTTGATTTTGATTGTGGCTGCACTAGTATGCACTCTGTGTATTCCAGTTTTGAGGCATAAGAATCTCTGGAAGCTGAAGCTATGGAAATGGGAGGTGATGATCCTTGTTCTAATCTGTGGTCGCTTAGTTTCGGATTGGGTAATCCGAATAGTGGTGTTCTTCATTGAGAGGAATTTCCTCTTGCGCAAGAGAGTGCTGTATTTTGTGTATGGAGTGAGGAAGGCAGTTCAAAATTGTCTATGGTTGGGGTTTGTTTTGCTGGCTTGGCATCTATTGTTTGATAAGAAAGTTGAGAGAGAGACTAGAAGTGACACCCTTAAGTATGTGACCAAGGTCTTGGTGTGTTTCTTGGTGGGTACTTTGGTGTGGTTGGTAAAAACTCTTGTGGTTAAGGTTCTGGCTTCTTCGTTCCATGTGAGCACGTACTTTGACAGAATTCAAGAGTCGCTGTTCAATCAGTTTGTGATAGAAACACTATCAGGGCCTCCTCTGATTGAGCTTCAAAAGTCAGAGGAAGAGGAGCTAAAGCTTGCTGATGAGGTGCAGAAACTGCAGAACGCCGGGGTTACCATTCCTCCTGATCTCAGAGCGACGGCTTTCTCTGCGAATACAAATGCGAATGCGAACGCGAATGCGAACAAGAGTCCGAGGGTGATCAAGAGTGGGACACTCCAGAAAAGCCCGCGTCTGATAAGTGGAAAGTTTTCTAGGCCACTTTCTCACAAGTCGTCAGATGATGCAATTACTATTGATCACCTGCATAAGCTGAATCCCAAAAATGTGTCTGCCTGGAATATGAAGAGGCTAATGAATATGGTCCGCCATGGCACGCTCTCGACACTAGATGAACAGATACTTGATTCGGCTACTGATGATGAAAATGCTACACAGATTAGAAGTGAAAATGAGGCAAAAGCTGCAGCAAAGAAAATATTTCAGAATGTTGCTAGGCGGGGTTGCAGGTACATTCACATGGAGGATTTGATGCGTTTTATGCAACCAGATGAAGCTGAAAAAACCATGAATCTCTTTGAAGGAGCATCTGAGACTGGGAAAATTAGCAAATCTGCCTTGAAGAACTGGGTGGTTAATGCCTTCAGAGAGAGGAGAGCACTTGCTTTGACATTGAATGATACCAAAACAGCAGTGAACAAACTTCACCGAATGCTAAATTTTTTAGTTGGCATCATTATATTGATTATATGGCTCTTAATATTGGAGATTGCCACCACCAAGTTTCTTCTGTTTGTGAGCTCACAGCTTGTCTTGGTTGCCTTCGTATTTGGAAATACCTGCAAGACGGTATTTGAAGCAATCGTTTTCTTATTTGTCATGCACCCATTTGATGTGGGAGATAGGTGTGAAATTGATGGGGTCCAGATGATTGTAGAAGAAATGAACATATTGACAACCGTATTTTTAAGATATGACAATCAAAAAATTATCATCCCCAACAGCGTTCTTGCTACTAAAGCCATACATAATTACTATAGGAGTCCTGACATGGGAGATGCTATTGATTTCTTCTTACATGTATCAACCCCAGCTGAGAAGATAGCAGTTATGAAGCACAGAATACAGAGCTATATTGATAACAAGAAGGAGCACTGGTATCCTGCACCATTCATAGTGTTGAGAGATCTGGAACATTTGAACATGATAAGAGTGTCAATTTGGCCAACTCACAGAATGAACCACCAAGATATGGGAGAAAGGTTTGTGAGGAGATCTCTTCTGATAGAGGAGCTTCTGAAGATATTCAGAGAGCAAGACATACAGTACCGTCTTCTTCCTCTTGACATTAACATCAGAAGCATGCCCACCACTTCTGAACGGCTCCCACCTAGTTGGGCCACAATCACAAACTGA 2856 0.4615 MDSLRKSFKSYYSYKHPMNIGPHSGHEQLPILLDQESSDDHLRRHHSPPPPSSMTSATPTAHRPEVIVKIDEGESKSPAAPQGNKIWRETSYDFWNDGKSDGSGASGMDDDGGFNFRQQGQGSEDPPSMLIGKFLHKQKASGDMSLDMDLEMEELRHEHEHHKLPPVDESPQLNRISKDLKVSFEEPASNVVEVAGDSVRRRYNKDSSGQAEFQKSPHDHRASPGGVVAQGGGDGEVVRCTSNASFERNVSMQRKSALLKVKTKSRLLDPPEEPDRRSGRVPKSGQMVSGLLGRRGGEDDEDDPFLEEDLPDEYKKTHFSIWVLLEWLSLILIVAALVCTLCIPVLRHKNLWKLKLWKWEVMILVLICGRLVSDWVIRIVVFFIERNFLLRKRVLYFVYGVRKAVQNCLWLGFVLLAWHLLFDKKVERETRSDTLKYVTKVLVCFLVGTLVWLVKTLVVKVLASSFHVSTYFDRIQESLFNQFVIETLSGPPLIELQKSEEEELKLADEVQKLQNAGVTIPPDLRATAFSANTNANANANANKSPRVIKSGTLQKSPRLISGKFSRPLSHKSSDDAITIDHLHKLNPKNVSAWNMKRLMNMVRHGTLSTLDEQILDSATDDENATQIRSENEAKAAAKKIFQNVARRGCRYIHMEDLMRFMQPDEAEKTMNLFEGASETGKISKSALKNWVVNAFRERRALALTLNDTKTAVNKLHRMLNFLVGIIILIIWLLILEIATTKFLLFVSSQLVLVAFVFGNTCKTVFEAIVFLFVMHPFDVGDRCEIDGVQMIVEEMNILTTVFLRYDNQKIIIPNSVLATKAIHNYYRSPDMGDAIDFFLHVSTPAEKIAVMKHRIQSYIDNKKEHWYPAPFIVLRDLEHLNMIRVSIWPTHRMNHQDMGERFVRRSLLIEELLKIFREQDIQYRLLPLDINIRSMPTTSERLPPSWATITN 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g1110 951 Gene3D - 776 825 IPR023408 -
Sto2g1110 951 Coils Coil 496 516 - -
Sto2g1110 951 MobiDBLite consensus disorder prediction 35 61 - -
Sto2g1110 951 MobiDBLite consensus disorder prediction 263 302 - -
Sto2g1110 951 MobiDBLite consensus disorder prediction 97 127 - -
Sto2g1110 951 SUPERFAMILY Sm-like ribonucleoproteins 766 825 IPR010920 -
Sto2g1110 951 MobiDBLite consensus disorder prediction 265 280 - -
Sto2g1110 951 MobiDBLite consensus disorder prediction 200 219 - -
Sto2g1110 951 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 3 167 IPR016688 -
Sto2g1110 951 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 200 950 IPR016688 -
Sto2g1110 951 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 200 950 - -
Sto2g1110 951 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 3 167 - -
Sto2g1110 951 MobiDBLite consensus disorder prediction 200 236 - -
Sto2g1110 951 Pfam Mechanosensitive ion channel 718 922 IPR006685 GO:0016020|GO:0055085
Sto2g1110 951 PIRSF Memb_At2g17000 45 951 IPR016688 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g1110 Sto-Chr2 9820928 9825714 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g1110 57 948 Mechanosensitive Ion Channel Family AT1G78610 57.468 0.0 982
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g1110 K22048 - gmx:102665658 1249.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g1110 2 9820928 9825714 Sto2g1110 2 9820928 9825714 ECH