Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g1090 ATGACATTACGAGGCGACTCGCCATCAGAAATTCATCCAATAATGGAAATTCCCCAAATCAAAGATCCAAGCCGCGATTTCCTCTCAAATCCTCGATCTTCCCCTTTTCTATTACGCGACGGTTTCAGCGATCCTCGCCTCGAAGTTTCCGACATAGAGATGATAACGATACCGGCGGTTAAGTACACGAGTCTCCGGGACATCTTGCCGGAGCAACCGTCTCCGCTGCCGGCGCCGCCGATCGCGTCTCCGGCGAAATCCTCCGGCAGCTGGAACAATGAGATCCCTATCAAGAATCCTCTCGTGAAGCAAGCCGCCTTGGCTTATCTCCAGCCAATGGCGTCGCCGGCGGAGGTCGGAGATAAGAGCGTCTTCGATATGGTGAAGGAGAAGTGCTTCTGTGGTGAGGGAGGAGAGTGGGAGTGCTTCCGGTGGCTTAACGACGTCGTTTTTGAGAGGATAGTGAAGTTTTTGGTTAGGTTATGTGAAGGGAGAAGAATTGATGAGGAGGAGGACGAAGAGAAGGGCGCCGCTGCTACCACGGAGAAGGAGAAGACCTACAAAGGCATCCAACGATGGCCCTGGGGGAAATTCGCGGCGGAGAAAAGGGATTCCACCAGGCATGGCATAAGGGTGTGGCTGGGAACGTTCGACAGTGCAAAGGCAGCGGCGTTGGCTTATGATCTGGCAACGTTCTACGTGAGTTACTCAAGGAGATGA 720 0.5347 MTLRGDSPSEIHPIMEIPQIKDPSRDFLSNPRSSPFLLRDGFSDPRLEVSDIEMITIPAVKYTSLRDILPEQPSPLPAPPIASPAKSSGSWNNEIPIKNPLVKQAALAYLQPMASPAEVGDKSVFDMVKEKCFCGEGGEWECFRWLNDVVFERIVKFLVRLCEGRRIDEEEDEEKGAAATTEKEKTYKGIQRWPWGKFAAEKRDSTRHGIRVWLGTFDSAKAAALAYDLATFYVSYSRR 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g1090 239 SMART rav1_2 186 238 IPR001471 GO:0003700|GO:0006355
Sto2g1090 239 Pfam AP2 domain 187 233 IPR001471 GO:0003700|GO:0006355
Sto2g1090 239 PRINTS Ethylene responsive element binding protein signature 187 198 IPR001471 GO:0003700|GO:0006355
Sto2g1090 239 PRINTS Ethylene responsive element binding protein signature 210 226 IPR001471 GO:0003700|GO:0006355
Sto2g1090 239 CDD AP2 187 232 IPR001471 GO:0003700|GO:0006355
Sto2g1090 239 PANTHER - 15 157 - -
Sto2g1090 239 SUPERFAMILY DNA-binding domain 186 233 IPR016177 GO:0003677
Sto2g1090 239 Gene3D AP2/ERF domain 185 238 IPR036955 GO:0003700|GO:0006355
Sto2g1090 239 PANTHER EXPRESSED PROTEIN 15 157 - -
Sto2g1090 239 MobiDBLite consensus disorder prediction 1 29 - -
Sto2g1090 239 ProSiteProfiles AP2/ERF domain profile. 186 239 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g1090 Sto-Chr2 9577938 9581448 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g1090 177 232 AP2-EREBP Transcription Factor Family AT3G23240 66.071 1.96e-20 84.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sto2g1090 AP2 2.8e-07 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g1090 - - pxb:108865972 134.42